| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1245 |
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| Symbol | |
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| ID | 5412074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1266412 |
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| End bp | 1267614 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868473 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001404406 |
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| Protein GI | 154150788 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGG TGACCATTCT CTATGTCGAT GATGATCCAA ACCTCCTTGA GGTAGGCAGA
ATCTATCTTG GGAAACTGGG AGATTTCAAG GTAGATACCG CACTTTCCGC AAAAGTGGCG
CTTGAAAAAC TTGCTCTCCT GGATTACGAT GCCATTATCT CAGATTATGA AATGCCTAAG
ATGAATGGCA TCGAATTTCT CAAAGAGGTA AGGAAGGAAT ACCACACCCT GCCGTTTATT
ATTTTTACCG GACGGGGCCG TGAAGAGATC GTTATTGAGG CGATCAACAG CGGGGCAAAC
TCCTATCTCC AGAAGGGTGG CGATCCCGAG GCGCAGTTCA CCGAGCTCGT TCACCGGGTC
CGCCAGACCG TCCAGAGCAA CAGGGCAGAT CTTGCACTCC ATGAGAGTGA TGAAAAATTC
CACAAGATCT TCAACAGCGT CAATGACGCC ATTCACATTC ATGAGATTGA CGACAACTAC
CTGCCGGGGA AATTTATCGA CGTCAATGAT GCTGCCTGCC GGATGCTGCA GTACGAGCGG
GCCGAACTCC TGACAAAGAC GCCGCTTGAT TTTGCCGTAG AAGAGCACAG CCGTCCACTC
GACAAAATTG GGAATACTCT GAAAAACGAA GGAAATCTGA TTTTTGAAAC AGAACATATC
CGGAAAGACG GCACCCGCAT ACCGGTCGAG ATCCATGCAC ATGTCGCGCT CATGAGCGGG
AAAAAAGTGG TTGTATCCGT CATACGCGAT ATCAGCGAAC GTATCCGGGA AAATAAGATC
CTCCGTGCTG AAGTCGAACT GACAACTGCC CTCCAGAAAG TCCGGGGGCT TACAGAAACC
CTAAACATCT GTCTCTCGTT TGCCCTCGAA GCGTCCGGGC TTGATTCCGG TGAAATTTAC
CTTATCGACC CCTCTACCGG TTCCCTGGAT CTGAATGTTA GCAACAATGT ACAGGCCGAA
CTTCGTGTCT CTGTGGCCCA GTACCCCGCC GGCACCACCT TTACCTCTCT TGTCACTGCC
GGGGAAACCC TGTTATTTTG CTGGCAGGCA AAGCGCGCCG GTTCATCCGG GTACCACGGC
CGCATCCGGT GTCCGTGCAT ATGCAATAAT CCCGGTAAAC TCACAGGACC ATACCATCGG
CTGCATGGCA CTCTCTTCCA GAGAGGGAGA CGAGATCTCC TCCCATGCCC GGATCGTTCT
TGA
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| Protein sequence | MSPVTILYVD DDPNLLEVGR IYLGKLGDFK VDTALSAKVA LEKLALLDYD AIISDYEMPK
MNGIEFLKEV RKEYHTLPFI IFTGRGREEI VIEAINSGAN SYLQKGGDPE AQFTELVHRV
RQTVQSNRAD LALHESDEKF HKIFNSVNDA IHIHEIDDNY LPGKFIDVND AACRMLQYER
AELLTKTPLD FAVEEHSRPL DKIGNTLKNE GNLIFETEHI RKDGTRIPVE IHAHVALMSG
KKVVVSVIRD ISERIRENKI LRAEVELTTA LQKVRGLTET LNICLSFALE ASGLDSGEIY
LIDPSTGSLD LNVSNNVQAE LRVSVAQYPA GTTFTSLVTA GETLLFCWQA KRAGSSGYHG
RIRCPCICNN PGKLTGPYHR LHGTLFQRGR RDLLPCPDRS
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