Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1187 |
Symbol | |
ID | 5412172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1198397 |
End bp | 1199731 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640868413 |
Product | hypothetical protein |
Protein accession | YP_001404348 |
Protein GI | 154150730 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.449645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00587961 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGTGCAGAT CCCATGCCAG AGAGCGAAGC GTATCAAAAA ATAGGGGGAA TGACACCATG AAAACACTGA AAGTTAGCAT CATCCTGCTT GTATTCCTGC TCGCAGCGAT GATGATGGTA CCGATGGTGA GTGCGATTGA GCAAAGTACA GTAATCGCAT CTCCCAATCA AACGAATGCA TCGACAATTG ATGTCAGTAA AATTCAACTG CCCCAACTCA TTTATGACAA AAATCAAACG CCAATCGTGA TGAACGATGA AATGAGCCTT GACCCAAATA TCCAAAGTAC TCAGATTGCG AGGATGGTAG AAGGAGCAAG CAATCCAGCA ATATCCAAAA TACCCTTCGG TGCAATTATT CATCACTCGA TTGATGGTAT TACAACGGTA TTTGATTCTA CGGGAAAACA ACTCTTTACT GCAGACGATA GTAAAGCAGG TCTCGTAAGC ACGTTTAAAG GACGTGTGCC AGCGACACAT GTTCAGGAAG TTCCCGACAA ATCAGTAATT TATGACATGG GCAATGTGCT GTACGTATTT AGCAATAATA TGTTAATCCT GACAGTTACC GATGATAGCA TCTCTGGGAA AAACAGCGCT TTAACGGCGA GTAGCTCCTC GACAATCAGT CCGCAATGGA TTGAATGGGG TTCAACTAAT GCTATACCCA CTGCTGTTGG GCAATTCATA TCTCAGTGGA ACGTTCCAAC TAAACCAACC CTTACGAAAA GTTTGGTTAT TGGAAGTGTG TATTATGATT CGTCGTTGGA GATCTGGAAT GGACTTGAAA ATGACCCCAG TTTATTGCAG CCAGTTCTTG AATGGTATAT GAAAGACGGT TACCAAATTC CAAGCCCCAG TACTCCACAA TGGACCATGG CAACATGGTA TGTATGGGGG AGTGGCAATT CATTTATTCA CTCGACCAGA ACCTCTGGAA TTTACTCAGG TGATCAGATG CAGGGAAATA TCCAGTTAAA TACACTGGGA TATGATGGCA TAGCATCAAT TACGGATTTG GGCAATCAAG GTGGAGGCAG CTCAACGCTT TTCCTTGCCA AAAGCTCAGC GCCTATAAGA ATGCCAACTA CAAATCTGCA GGCAGAGATA GTACTGGAAG GGTGGGATCC AACAACTCCA TTGGGTGGCC TGAATTCACA ATATTTATGC GGACCTATCA CGTTCCAGAG TTTTGTGTTA AAAGACAGTA ATGGAAATAA TCTTATCTCA AATTATCCTA TGTCAGGATA TTACAATACT AATTATTGGA ATCCCTCAAC CTATGGATTA TCGATCTCAA ATCTTTGGCC AACGAGCATT ACCCTGGGAA CCTAA
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Protein sequence | MCRSHARERS VSKNRGNDTM KTLKVSIILL VFLLAAMMMV PMVSAIEQST VIASPNQTNA STIDVSKIQL PQLIYDKNQT PIVMNDEMSL DPNIQSTQIA RMVEGASNPA ISKIPFGAII HHSIDGITTV FDSTGKQLFT ADDSKAGLVS TFKGRVPATH VQEVPDKSVI YDMGNVLYVF SNNMLILTVT DDSISGKNSA LTASSSSTIS PQWIEWGSTN AIPTAVGQFI SQWNVPTKPT LTKSLVIGSV YYDSSLEIWN GLENDPSLLQ PVLEWYMKDG YQIPSPSTPQ WTMATWYVWG SGNSFIHSTR TSGIYSGDQM QGNIQLNTLG YDGIASITDL GNQGGGSSTL FLAKSSAPIR MPTTNLQAEI VLEGWDPTTP LGGLNSQYLC GPITFQSFVL KDSNGNNLIS NYPMSGYYNT NYWNPSTYGL SISNLWPTSI TLGT
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