Gene Mboo_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1178 
Symbol 
ID5410783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1188679 
End bp1189302 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID640868404 
Producthypothetical protein 
Protein accessionYP_001404339 
Protein GI154150721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.26968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTAA TCACAGGTAT CCCGATAGCC GGCGCTGAAA ATGTAACACC CGTAACAACA 
CCCTTCATCA CCATCGATCC TATCGGTAAC CATACGATAG ACAGTCCTTT CTTTATCAAT
GGTACGACGA ATCTTGCGGC GGGAAATGTC CTCCAGTTGG TGATCGAAAC AACGAATTTT
AACCCGGGAG GTGCCGGGTC CGGACTGGTT GCCAACGTGA CCGTCCAGCC AGGACAGGAC
AGTGTCAATG TATGGTCGTG CAATGCCACG ACCTATCTCT GGGAGACTTT CGGGCCCGGT
TGCTGCCAGG TACCCACACC TGATGCAGTT ACCCCGGGGG AATATGTCGT GATGGTTACC
AGTGCTCAGG CGTATGACCG CGAGCTCTTT TACATGCTGC CGGCTGAATC TCTCCCGACT
GGGGCAATTA TGTCGTTACC GGTAAGTTCT CCATCCGCAA ATTCCGCGGA CGATCAGGAA
ACGCCCTTCC CTGTCTCTAC TACGATTTAT GTCCCGACAA ATCCGACGAC CCGGTCATCA
CCCTTATCCG TGGCAATACC TGTCGTGGTG ATTGCGGCAA TGGTAATTGT GGGATCCATA
TGCAGGCGAA ACCGACGAAT TTAG
 
Protein sequence
MVVITGIPIA GAENVTPVTT PFITIDPIGN HTIDSPFFIN GTTNLAAGNV LQLVIETTNF 
NPGGAGSGLV ANVTVQPGQD SVNVWSCNAT TYLWETFGPG CCQVPTPDAV TPGEYVVMVT
SAQAYDRELF YMLPAESLPT GAIMSLPVSS PSANSADDQE TPFPVSTTIY VPTNPTTRSS
PLSVAIPVVV IAAMVIVGSI CRRNRRI