Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1169 |
Symbol | |
ID | 5410438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1169010 |
End bp | 1169963 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640868395 |
Product | periplasmic solute binding protein |
Protein accession | YP_001404330 |
Protein GI | 154150712 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.693162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCGA AAACGTATGT CGCCATCGGA GGAATCACAT TTTTTATCAT TATGGCTATT TTTATTATTG TGGCGGGTTG TACACAGTCA AATTCTGTTG CGACTCCTCC CAATTCTATT CTCAACAACA CAACCCAAAA GATACAGATT GTTGCGGCTG AAAATTTCTG GGGCAGCCTG GTTTCACAGA TTGGCGGGAC GCATGTCCAG GTGCTGAGTA TAGTTTCAGA TCCTAATGCC GATCCCCATG AGTATGAAAG CAATACTGCG AATGCGCGTG CATTTGCAAC GGCAGACTAT ATCGTTGTCA ACGGTGCCGG ATACGATGAA TGGGCTGACA AACTTATTGG GGCAGGGATC AAACCGAATG CCAAAGTGCT GAATGTGGCC AATCTTATTG GACAACAGAA CGGCGATAAT CCTCATTTCT GGTACAACCC TGATTACGTG AACGAGACTA CAAAACAGAT GGAATTAGAT CTTATTTCCA TCGATCCGTC CAATGCCAAA GACTATGAGC AGAATTATGC CAACCTGCAG GTATCGCTGT CCCAATACCA GAACCGGATC GGCGAGATCA AACAGCAATT CGGGGGCACG AAAGTTGCAG CCACCGAATC CATCTTTGAA TACCTGGCAA ACGCTACCGG CCTGGATCTT GTCTCACCCC CGGCATTTAC TCACGCTGTG GCCGAAGGAA ACGATCCACC GGCAGACAGT GTTGTCCAGT TTGAAACACA GCTCCAGAGC GATAATGTGA GTGTGCTTGT CTATAACCAG CAGACAGTTA CGCCGCTCAC TGATAACATA AAGAAACTGG CCTCAGAACA GGGGATCCCT GTTATTGGTA TAACAGAGAC TATCCAACCC CCCGATGTCT CATTCCAGGA CTGGATGAAC GCAGAGTTAA TCTCTCTTCA GAACGCGCTC AATGCAAAAT CTCTGGGAAG TTAA
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Protein sequence | MKSKTYVAIG GITFFIIMAI FIIVAGCTQS NSVATPPNSI LNNTTQKIQI VAAENFWGSL VSQIGGTHVQ VLSIVSDPNA DPHEYESNTA NARAFATADY IVVNGAGYDE WADKLIGAGI KPNAKVLNVA NLIGQQNGDN PHFWYNPDYV NETTKQMELD LISIDPSNAK DYEQNYANLQ VSLSQYQNRI GEIKQQFGGT KVAATESIFE YLANATGLDL VSPPAFTHAV AEGNDPPADS VVQFETQLQS DNVSVLVYNQ QTVTPLTDNI KKLASEQGIP VIGITETIQP PDVSFQDWMN AELISLQNAL NAKSLGS
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