Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1166 |
Symbol | |
ID | 5410435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1166082 |
End bp | 1167239 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640868392 |
Product | geranylgeranyl reductase |
Protein accession | YP_001404327 |
Protein GI | 154150709 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.355185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGC CGGCGTATGA TGTCGTGGTT GCCGGTGCCG GGCCGGCTGG TTCTGCTGCC GCCCGTGCCT GTGCAGAGCA GGGGCTTTCG GTGCTCTGTG TGGAAGAGCA GGGAACCATC GGGTACCCGG TCCAGTGCGC CGGCCTCCTT TCCCGGGCAG CTTTCGAAGA ATGTGCAGTT TCGCGGCGAT CGATCCAGAA TACCGTGACC GGCGCCCGGA TCGTGCCTTC GTCCGGGCAA CCTCTGACAA TAAACGCCGG AGTCCCCAAG GCATATGTTG TTGACCGTGC CCTGCTTGAT CGGGAGATGG CGCAGGCAGC AGCTGATGCG GGAGCAGAGT TCCGGCCCAA AACGGCGGTC TGCGGAATAC AGGACGGGAA GGCGATAACC CGGGGGGCTA ATGGGCATGA AGAGATTCCC TTTCGCATCC TGATCGCGGC GGATGGCCCG CGGGGTACAA TAGCACGATC GCTTGGGTTT GCCCGGCCGC CGGTCTTTTT GGCCGGCATC CAGGCCGAGG GAGTTTTGCA TAAGGAAATC GATCTGGTGG AACTGTACCC GGATGCATCC CCGGAATTCT TTGGGTGGGT CATTCCCAAC GGTAATGGAC GGGCAAGGGC CGGTCTGTGC GGGAAAGTGC AGGTCAAAGA ACGCTTTGCC GCATTTCTCA AAAGAACCGG TCTTCAATCC GATCTGCACC TGGTCACCGG CACGATCCCT CTTGGTGTGA TGCCTCGTAC CTATGGACAA CGGACGCTTT TTGTGGGAGA TGCCGCCGGG TTTGCCAAAC CTACCTCTGG CGGGGGGGTG TACACCGGTG TCCGGTCTGC CCGGCATGCC GCAGCGGTGG CAGCTGCCTG CTGCGAACAG GACTGCTTCT CCGATAGTGC GCTTGCAGAG TACGAGCGGC GCTGGCAGGA GGATATCGGG CGGGAACTCT CCATGGGGTA CCGCCTTTTC CAGATGCGCC AGCACCTTCC GGCAGAAACT ATAGACCAGA TGATCCATGC AATGAGCGAT CCGGCAATAG TGCAGGAAAT CCTCCGGTAC GGGGACATGG ACCGGCCTGC AAAAATTGCC GGCATCCTGG TCCGGCATCC TTCGCTTTTC CGGTTCTTTT CGCCTCTTCT TCTTTCCGGT ATTCGATCGT TTTTTTAA
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Protein sequence | MSRPAYDVVV AGAGPAGSAA ARACAEQGLS VLCVEEQGTI GYPVQCAGLL SRAAFEECAV SRRSIQNTVT GARIVPSSGQ PLTINAGVPK AYVVDRALLD REMAQAAADA GAEFRPKTAV CGIQDGKAIT RGANGHEEIP FRILIAADGP RGTIARSLGF ARPPVFLAGI QAEGVLHKEI DLVELYPDAS PEFFGWVIPN GNGRARAGLC GKVQVKERFA AFLKRTGLQS DLHLVTGTIP LGVMPRTYGQ RTLFVGDAAG FAKPTSGGGV YTGVRSARHA AAVAAACCEQ DCFSDSALAE YERRWQEDIG RELSMGYRLF QMRQHLPAET IDQMIHAMSD PAIVQEILRY GDMDRPAKIA GILVRHPSLF RFFSPLLLSG IRSFF
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