| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1161 |
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| Symbol | |
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| ID | 5410430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1162436 |
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| End bp | 1163746 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868387 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001404322 |
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| Protein GI | 154150704 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.871215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCA GGAGCGAACG AAAAGAAGGC GTGCTTGTCT TCTTTATCAA CGGACGGCTG
GATGCGTTTG GCGCCCAGCA GCTGGATGAA TGGATCAAGG GCGCACTGCA TGACGATGAT
AAGGAACTGG TACTGGACCT GTCCGGAACC ACGTATCTTT CCAGCGGCGG GCTGCGCACG
TTCAACATGC TCAAAAAGGA GATGAAACGC AGGAACGGGC GCTTTGCCTT AGCTGCGGTT
GGGGAATACC CAAAAAAAGT GCTGGATATG GCAGGGTTCT CGACCATCCT TGAGATATTC
CCGACTACGG ATGCGGCGGT TGACGATATA CGCAAGAAAC GCAGGAACCC GACACTCTTT
AACGAGATCT TTTACAAAAA GATCGAGGAA GAAGGGATCT CCCTTACCAT CGAGCCCGGC
TGGATGACCA GCCCTCCCGT GCTCCGGATC ACGGGCGATC TTTCAAAGGT GCTGCACGCT
AAGCTCACCG AGGCGGATAT AAAAACCAGG AAGTTCTCCG AGATTACGTA CTCACTGGGC
CTCGGGGCGC TTGGGGCAGA CAAAAAGGAT GCAATGCTGC TTCTTGGTGA GATGATCACG
CTCTACGGCT CCATGGTCTG GCTGCCTACC GATGGGAATA ATACCCCCGA TTTTCTCACA
CCTCTCGATG CGGAGGCTGA TGTACCGGTG TACACAGGCT ATAACGTGAC CCTGGACGGC
CCGTTCAACG AGTACCTGGC GCTTTCTGTC GAAGAGGGAA AGAGCGTGAG CATTGCCGAT
ATATACCGGA TGATCTTTGC CGGTGCCAGG GATCGGGGAA TCAAGAGTTA CAAGGGAGTG
GTTGCGGTTG CGATCTGGGG CGTGATCGAT GGTCTTGCAA GCTCCGGGAT CAAGAAGGCC
CCGGTTGCAG GCACCGGGTT GCCCGGCACT GCCACGATCA TGGATCCGGC CATCTCCGGC
GAGTGGATGG CATCCGACAC CGGCATGTCC TATAAGGGCG ATACGCTGGT GAGTTTTGGC
TTTGGGATCG ATCTTGCCGC AAGCATTACC GGCTTCCAGC CTGAGGATCT CGATGCGCTG
TATTATGCAA ACCCGGCGAG CCGGGCAGCA TCAAAAGCCA CATATCTCCA CAACCACGGG
GTAGTATTCC GCGGCGTCCC CTTCGATGCT TCGCTTGATC TCAATACCCA GGTAAAAAAG
ATCGTAAACG ATGCCACGTT TGTGGATATG CGCCACCTGC TGGACAGCAC CCGGCTCCGG
CGCGCAAAGA TCGGCGTTGC GTATATCCAG GAGATTGTGC GCGAGCCCTA A
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| Protein sequence | MEARSERKEG VLVFFINGRL DAFGAQQLDE WIKGALHDDD KELVLDLSGT TYLSSGGLRT
FNMLKKEMKR RNGRFALAAV GEYPKKVLDM AGFSTILEIF PTTDAAVDDI RKKRRNPTLF
NEIFYKKIEE EGISLTIEPG WMTSPPVLRI TGDLSKVLHA KLTEADIKTR KFSEITYSLG
LGALGADKKD AMLLLGEMIT LYGSMVWLPT DGNNTPDFLT PLDAEADVPV YTGYNVTLDG
PFNEYLALSV EEGKSVSIAD IYRMIFAGAR DRGIKSYKGV VAVAIWGVID GLASSGIKKA
PVAGTGLPGT ATIMDPAISG EWMASDTGMS YKGDTLVSFG FGIDLAASIT GFQPEDLDAL
YYANPASRAA SKATYLHNHG VVFRGVPFDA SLDLNTQVKK IVNDATFVDM RHLLDSTRLR
RAKIGVAYIQ EIVREP
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