Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1125 |
Symbol | |
ID | 5411431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1129975 |
End bp | 1130667 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640868351 |
Product | hydrogenase-4 component E |
Protein accession | YP_001404286 |
Protein GI | 154150668 |
COG category | [C] Energy production and conversion |
COG ID | [COG4237] Hydrogenase 4 membrane component (E) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.457842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.790146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC CCGCATTCTT TGACGGCCTT GTCAAGATCC TCTTTGTCTG CGTGATCGTC ACCTCCGCGT ATATCATCAC GACCCGGAAC CTGGTCTCTC TTGTCCGGGT GTACGCGCTC CAGTCGCTCT CGCTTGTGGC AATCGCGCTT GCCCTTGCAT GGTACGAGAA TGCGGCAATC CTCCTTGCGA TTGCCCTTCT CACCCTGGTC TTCAAGGTGA TCGTCATCCC GTACTTCATC GCAACCGTCC AGGAGAAGAT CCGGATAAAA CGGGACATCG AGTTCCATTT CCTCAGCCCG GCAAGCTCCC TCCTGATCTC GCTTGCCCTC ATGATCGTCG TGTACATCAC GCTCTCCCGG GTATTCTCCC CGGCTCCCGC TGAAGGCAGC CTCTTTTTCT TCGGGGCGGT CATCGGGATC TCGCTTGTCA TGATGGGCAT GATGGTGACG TTCTCCCGGA AAAAGGCGAT CACAAAAGTG CTCGGGTACC TTTCTATGGA GAACGGGGTG CTGCTCTTTG GGCTCTTTGC CACCGAGCTC CCGTTCATCA TCGAATTTCT GATCGTAATA GACCTGGTCA TCCTCATCCT GTTAACCACC ATCCTCACGG TCGGGATAGA CTCTACGCTC GAGGATTACC ATAACCGCCT CCACCGGTTC TACCTCTGGG AAGACCAGGA GGAATCGCCA TGA
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Protein sequence | MSDPAFFDGL VKILFVCVIV TSAYIITTRN LVSLVRVYAL QSLSLVAIAL ALAWYENAAI LLAIALLTLV FKVIVIPYFI ATVQEKIRIK RDIEFHFLSP ASSLLISLAL MIVVYITLSR VFSPAPAEGS LFFFGAVIGI SLVMMGMMVT FSRKKAITKV LGYLSMENGV LLFGLFATEL PFIIEFLIVI DLVILILLTT ILTVGIDSTL EDYHNRLHRF YLWEDQEESP
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