Gene Mboo_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1115 
Symbol 
ID5411359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1114316 
End bp1115245 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID640868341 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_001404276 
Protein GI154150658 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.275273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.917906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC TGGTACTGGG AGCAGGAGCG GTGGGATTGT CGGTAGCGGC AAAGCTCTCC 
ACAGTCTGCG AAGTCGACGC GGTTTCCAGG AGAAAAAACG CCGAGGCGAT CCGTGCAGAG
GGTTTTTCGC TCTCAGGCAT CTGGGGATCC GATACCGGTC ACTTCAGCAT TTCAGAGAGC
GTTCCTGAAA ATGCCCGGTA CGATTATATT ATTATCACAT CAAAGTCCCA GGACACCGAA
TCACTCTGCC GGGAATATGC TGCCACGCTT CGGGATACCG AAACCGTGAG CCTGCAGAAC
GGAATCGGAA ATGAGGAGAT CATCGGCAGA TACACCAATA GGGTAATCGG CGGAATGATC
ATCACCGGTT TTGAATGGCG GGCAGATAAC CAGGTCCATG TGTCCGTTGA GGCAGGCCCG
GCCAGACTCG GGCGGTTCCC GGAGGGTCTT GATGACCCGG TTCGTACGCT TGTCTCTCTT
ATGGCCCGGG CCGGGATCCG GGTTGAAGGC ACACCGGAGA TCCGCTCCGA GCTCTGGGGA
AAAACCCTCT ATAACTGTGC ATTAAATCCC CTGGGTGCGG TGATGGGAGT GCCATATGGG
GATCTTGCCC GGCCTGCTGC CTGGAGGATC ATTACCCGGA TTGTGCACGA AGGTTTTGCC
ATTGTCAGTG CAGAGGGGGT CCGCCTTCCC TGGAAAACAG CGGACGAATA CCTGGAGTAC
CTCAAAAATG TCCAGCTCCC GGCAACTGCA CTGCATCATT CGTCCATGCT CCAGGATATC
ACCCGGGGTC GCCGCACCGA GATCGATTTC CTCAACGGTG CCATTGTGGC AAAAGGGGCT
GGTCACGGTA TTCCCACACC GGTGAATGCC TGTATTACCG ATCTGGTGAA ATTCCGCGAG
GCGCTCGTTT TACAGGGTGC TCCAGGATGA
 
Protein sequence
MKVLVLGAGA VGLSVAAKLS TVCEVDAVSR RKNAEAIRAE GFSLSGIWGS DTGHFSISES 
VPENARYDYI IITSKSQDTE SLCREYAATL RDTETVSLQN GIGNEEIIGR YTNRVIGGMI
ITGFEWRADN QVHVSVEAGP ARLGRFPEGL DDPVRTLVSL MARAGIRVEG TPEIRSELWG
KTLYNCALNP LGAVMGVPYG DLARPAAWRI ITRIVHEGFA IVSAEGVRLP WKTADEYLEY
LKNVQLPATA LHHSSMLQDI TRGRRTEIDF LNGAIVAKGA GHGIPTPVNA CITDLVKFRE
ALVLQGAPG