| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1074 |
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| Symbol | |
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| ID | 5409802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1065411 |
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| End bp | 1066856 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640868300 |
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| Product | replication factor C large subunit |
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| Protein accession | YP_001404235 |
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| Protein GI | 154150617 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.106166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGGG CAGAGAAGTA CCGGCCTGAG CACCTCGCGG ATATTGTGGG AAACACAAGT
GCTGTGCGCC AGATGGCCGA CTGGGCAAAA ACCTGGACTG CACGCTCAAA GCCTCTTCTC
CTGTATGGCA AGCCCGGCAT CGGCAAAACC TCGAGCGTTT ACGCGCTCGC CCGGGATATG
AACTGGGACG TAATCGAGCT CAATGCAAGC GATCAGCGGA CGGCAGCCGT GATCGAGCGC
ATTGCCGGCG CGGGGAGCAC GACAGCAAGC CTGACCGGTT CGGCACGGAA ACTCATCATC
ATGGACGAGG CCGACAACCT GCAGGGGACT GCAGACCGGG GCGGGGCAAA GGCAATCCTT
GAGTGCATCA AAAACGCCCG GCAACCCATT GTCCTGATCG CAAACGACCT CTACGGGCTC
GCCGCCGAGC TCCGCCTGCG CTGCGAGCCG GTCCAGTTCA GGGCGCTCCC GGCACGTTCG
ATTGCCCCCC GGCTCAAGTA CATCTGTTCC TCCGAGAAAA TTGCATGTTC AGAGTCCGCG
GTTCACGAAA TTGCCGAGAG CGCGGAAGGG GATATGCGCT CGGCAGTAAA CATGCTCTAT
GCCTCAGCCA TCGGCAGGCA GTCGCTTGAT GGAAAAAACG TGCATACCTC CCAGAAAGAC
GAGCGGGTCT CGATCTTCTC CCTTGTTACC GCTGTCTTCG GGAAGACCTC AGATGAGGAA
CTCATAAGGC TCTCCCGGGA TGTGGACGAG TTCCCTGAGG ATATCGAGCA GTGGGTGGAG
GGGAGCGTGC ATACCATTAC CGATCCGGCT GGGCTTGGTC TGGCCTACCG CTCCCTCTCG
CGGGCAGACG AGTACATCGG TTACACGTAC CGCCGGCAGT ACCACACGCT CTGGCGGTAC
GCAACAGCGG TGATGCTGCT TGGTGTTGCC GATGCTTCGG CGGGAAAAGG CATCCATTCC
CGGATCCTCC CCCCCGAACG CTGGCAGAAG ATGTCCGTGG CAAAGAAACA GAAGGCCATC
CGTGCCGCGG TGCTCTCGCG CCTGGCTGCA ACCATGCAGC TCCCGCAGGC GACCCTGCGG
GAAAAGTACA TGGACATCAT CACCCTGCTT GTGGACCTCG ACCCGGAGAC GTTTGCCCGC
GAACTTGCGC TGGATGCCGA CGGGCTCAAC TTCTTTTTAA ATGACAAGTC CCGGGCACAG
GAGATCCTAA AGTCTCTTGC AAAGGTGGAA CGGGAGAAGG AGCCGGAGCC AAAGAAGAAG
GGCAGGAAAA AAGCGGAGAG CCCCGCAAAG GATGCCGATC CGGCCCCTGC CGTGGACCCG
GTCCCAAAAG AAGAGCTGCC GGTCAAATCC GCACCGGAAG AGCGGCCCGC CGATCCCCCG
GCACCGGAGG AGCCCGGCAG GAAAACCGTG GCCCACAACC AGTCAACGCT CTTTGACGGG
TTCTGA
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| Protein sequence | MEWAEKYRPE HLADIVGNTS AVRQMADWAK TWTARSKPLL LYGKPGIGKT SSVYALARDM
NWDVIELNAS DQRTAAVIER IAGAGSTTAS LTGSARKLII MDEADNLQGT ADRGGAKAIL
ECIKNARQPI VLIANDLYGL AAELRLRCEP VQFRALPARS IAPRLKYICS SEKIACSESA
VHEIAESAEG DMRSAVNMLY ASAIGRQSLD GKNVHTSQKD ERVSIFSLVT AVFGKTSDEE
LIRLSRDVDE FPEDIEQWVE GSVHTITDPA GLGLAYRSLS RADEYIGYTY RRQYHTLWRY
ATAVMLLGVA DASAGKGIHS RILPPERWQK MSVAKKQKAI RAAVLSRLAA TMQLPQATLR
EKYMDIITLL VDLDPETFAR ELALDADGLN FFLNDKSRAQ EILKSLAKVE REKEPEPKKK
GRKKAESPAK DADPAPAVDP VPKEELPVKS APEERPADPP APEEPGRKTV AHNQSTLFDG
F
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