Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1026 |
Symbol | |
ID | 5411489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1005433 |
End bp | 1006701 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640868252 |
Product | hypothetical protein |
Protein accession | YP_001404187 |
Protein GI | 154150569 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1361] S-layer domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.441563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.903414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCAGA CCATACACCC ACGGGCCACT CCCGATAACG GGAAACTTTC CCCAACGGAA AGACCGGCCG GCCAGATGCA GGAAAGAGTG AGACAAAAAA AATTCCCCGG CTCCGTGAGC GGGATATTTT TGCTCCTTGC CGTTACGCTG GGGATCTTTG CGATTCCGGT GTCTGCCTAC CCTACGCCTT ATTCTCTCTC GGCAGATTCC AGCGTATATG TCTCTAATGT TACGTATTAC CCGGGCGCTT TTTTTTCCGG TGACAGCGGT ACGGTCACGT ACCAGGTGAT CAACGGCAAT ACCAACACGA GCATGGTGGT AAATCATGCA TCGTTCAGCG ATACCGATAT CCGGCTGACA AGCGGTACCT ATGATTCCTC GCAAAACATC GGTCCTCTCC AGACAGAGCC GTTTACGTTT TCGATTACCA CCAATGCGAG TGACGGCAAC TACTACCCCA CCTTCTCCCT TTCGTTCCAG GATGGCGAGT CCATGCACTA CCAAGGACTG GTCAAGGTGG ATAACCGCCC GCTGGTCATG ACCATCCAGG ACCAGCCGGA TGCCTATACC CAGGGAAAGA AGAACACGAT CAGCGTGCAG ATCGCAAACC CCCGGTCCGA CGATGTACAC AATGTGATCT TCACGGTTTC CGGTGATGGC GCTACACTTA CGCCATCGCA GACCTATATT GGGGACCTCC CGTCAGGAGC CATGACGCTG GTCAATTTCA CGGTTACACC AAATGCACCC ACCACCCTGA ACCTGGTGGT CGGTTACGAC AATGGCGATA ACGCACACAG CATCGATTCG ACCCTTCCAA TCCAGTTCAC CACAGACAAG CAGCAGGCCG ACCCGGTGAT GAGCAACATC GTTATTACCG CCAATGGCAC GGTCTACACG GTCAACGGTG ATTCAACCAA TGCCGGACTT TTAAATGCAA ATGGTGTAAC GATCACCGCT CTTTCCCCGG CAGTTCCGGA AGATCCCTAC CAGAATTACG TGATCGGGAC ACTCAAACCT GACGATTTCG GCAGTTTCGA ACTTACCTTC TCCGTCCCTG AGGGAACAAA GAGCATTCCC CTCAAGCAGT CCTTCAAGGA TAGTGACGGC AACGTGATCA CTTCAACCCA GGATATTGAC CTGACAACTG CCCAGCAGGC TTCGCAAAGC AATGCCGGTC CGGGAATGCT CCCGGTGCTT GTCGTTGTTG CCATTGTCGT GATCGGTGCG GGCGGCTACC TGTATATGAA AAAGAATCGG AAACAGTGA
|
Protein sequence | MIQTIHPRAT PDNGKLSPTE RPAGQMQERV RQKKFPGSVS GIFLLLAVTL GIFAIPVSAY PTPYSLSADS SVYVSNVTYY PGAFFSGDSG TVTYQVINGN TNTSMVVNHA SFSDTDIRLT SGTYDSSQNI GPLQTEPFTF SITTNASDGN YYPTFSLSFQ DGESMHYQGL VKVDNRPLVM TIQDQPDAYT QGKKNTISVQ IANPRSDDVH NVIFTVSGDG ATLTPSQTYI GDLPSGAMTL VNFTVTPNAP TTLNLVVGYD NGDNAHSIDS TLPIQFTTDK QQADPVMSNI VITANGTVYT VNGDSTNAGL LNANGVTITA LSPAVPEDPY QNYVIGTLKP DDFGSFELTF SVPEGTKSIP LKQSFKDSDG NVITSTQDID LTTAQQASQS NAGPGMLPVL VVVAIVVIGA GGYLYMKKNR KQ
|
| |