Gene Mboo_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0935 
Symbol 
ID5410052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp918294 
End bp919433 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content59% 
IMG OID640868161 
Producthistidine kinase 
Protein accessionYP_001404096 
Protein GI154150478 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.957792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0100677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACCAA ACAAGGCCAG GATGCCGGAA AAAGGATCTG CGGCCGACCC GGGAGCCGCA 
GTGCTTGCGG CAATCGAGCA GGCCCTCCAC GAGGGAACCG CGCCCGAAGA CTACACCGGT
ATCGCAGACG CAGCGACCCG GCAGCGGCTG GAGACGGTCG TTTCCGGGAT TCTCTCTTCC
GAGCAGTTTG CCCTTTCTAT GGCAGAGGGA AATCTCTCGC CGGATCTTGC CGCAACAGGA
TACCTTGCCG GCAGCCTCAA GGCGCTCCAG TCCAGCCTCC GGCACCTGAC CTGGCAGGCC
GGGCAGATCG CGGGCGGCGA TTACTCCCAG CGTGTCCGGT TCATGGGCGA GTTCTCGGCC
TCGTTTAACT CCATGACCGC ACAGCTTGCC CGCGAGGCAG CGGAAAGGAG CCGTCGCGAA
CAGGAGCTCC GGGATACAAA CGAGGCTTTG TCCCGGGAGA TTGCCGAGTA CCAGCAGCTG
CAACGGATGC TTGCGCTCAC CAACCGGAAA CTGGGCCTGC TTTCGAGCGT GACCCGGCAC
GATATCTCCA ACAAGCTCCT GGCCCTGGGG GCCTATATCG ACCTGATGCA CGAGAATGTC
CACCAGCCGG AAGTGCTCGA AGGCTACCTT AATTCCGAGG CAGAGATCTT AAAAATAATT
AACGGCCAGA TCCAGTTTGC CCGGGATTAC GAGGATATCG GGATAAAAGA GCCGGTGTGG
AACGATCTTG CCGCAATTCT TGCAGAGGCA TATACGGGCC TTGCATTCGG GAATGTCAGG
TTTGATGCCG CACCGGGTGG TGCGGAGATC TTTGCCGATC TCCTCATTGC AAAGGTCTTT
TACAACCTGC TGGACAATGC CCTGCGGTAC GGCGGGCCGG CCATGACAGA GATCCGGATC
ACGGCAGAAG AAGGCCCGGA TGGTCTTTGT GTCATTGTGC AGGACAATGG TGCCGGCGTT
GCAGAAGAAG ACAAAGAGCA ACTCTTTACC CGGGGATTTG GGAAGAACAC GGGTTTTGGC
CTCTTTCTCT CCCGGGAGGT CCTCTCTCTT ACCGGGATCA CGATCGCTGA AGAGGGCAGC
CCGGGATCCG GGGCCCGGTT CCGGGTTACG GTCCCAAAAG GGCAGTACCG CTTCCGGTAA
 
Protein sequence
MGPNKARMPE KGSAADPGAA VLAAIEQALH EGTAPEDYTG IADAATRQRL ETVVSGILSS 
EQFALSMAEG NLSPDLAATG YLAGSLKALQ SSLRHLTWQA GQIAGGDYSQ RVRFMGEFSA
SFNSMTAQLA REAAERSRRE QELRDTNEAL SREIAEYQQL QRMLALTNRK LGLLSSVTRH
DISNKLLALG AYIDLMHENV HQPEVLEGYL NSEAEILKII NGQIQFARDY EDIGIKEPVW
NDLAAILAEA YTGLAFGNVR FDAAPGGAEI FADLLIAKVF YNLLDNALRY GGPAMTEIRI
TAEEGPDGLC VIVQDNGAGV AEEDKEQLFT RGFGKNTGFG LFLSREVLSL TGITIAEEGS
PGSGARFRVT VPKGQYRFR