Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0899 |
Symbol | |
ID | 5410395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 883520 |
End bp | 884284 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868125 |
Product | hypothetical protein |
Protein accession | YP_001404060 |
Protein GI | 154150442 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000145532 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGTTTT CCATAGATTC GGGGCAATCG GGATCACTCC TGCCGTGGTC CCCTAAAGTC TCATCTGGCA GGAACACCCA TCCTGAGAAC AGCATGCCCG GCATCTCTCC CGCCCGGATC CTCCGCTCCC GCCGCAGGAC CGTTTCCCTG GAAATCACAA CTGAAGGGGA GCTCGTAGTA CGTGCCCCAC TCCGGGCACC GGAAACCTGG ATCCTGGCTC TCATTGAGGA AAAAAGGGAT TGGATTGAGA GAAAAATCGC TGATATGCAG AACCGCCCGT CACCGAAAAA GAGGCACTTT GCCACTGGGG ATGAATTCCT GTTCCTCGGA AAGATGTACA CGCTTGTGGT GCTTGCCGAA AGCGATGCGG CAGTTACCCT GGGTGACCAC CTGTATATTG GCGAGCGGAG ATTGCCGGAA TGCCGCGATC TTCTCATTGC GTGGTACGTT GAAAAGGCAA AAGAGATCCT GCCTGCACGG GTTGCCGGCA TCGCCGCAAT CCTCGATTAT GTTCCAAAAA AGATCCGGAT ATCCGATGCA AGGCGGCGCT GGGCCTCGTG CAGCAGCACC GGGACCCTCT CGTTCTCCTG GCGCCTGGTC CTTGCTCCCC CCGAGGTTAT CGATTACGTG GTAGTCCATG AGCTTGTGCA CCTGCGCCAG CCGGATCATT CGGAAAGGTT CTGGAAAAAA GTCCAGGATG CCATGCCGGA GTACGCGGAG CACCGGCGCT GGTTGCGCGA AAACGAGCGA ATGCTTGCGC TCTGA
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Protein sequence | MVFSIDSGQS GSLLPWSPKV SSGRNTHPEN SMPGISPARI LRSRRRTVSL EITTEGELVV RAPLRAPETW ILALIEEKRD WIERKIADMQ NRPSPKKRHF ATGDEFLFLG KMYTLVVLAE SDAAVTLGDH LYIGERRLPE CRDLLIAWYV EKAKEILPAR VAGIAAILDY VPKKIRISDA RRRWASCSST GTLSFSWRLV LAPPEVIDYV VVHELVHLRQ PDHSERFWKK VQDAMPEYAE HRRWLRENER MLAL
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