Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0891 |
Symbol | |
ID | 5411856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 872958 |
End bp | 873779 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640868117 |
Product | NifC-like ABC-type porter |
Protein accession | YP_001404052 |
Protein GI | 154150434 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0555] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR01581] NifC-like ABC-type porter [TIGR02141] molybdate ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.966064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.181406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCCC ACAGCCTCCG GCCAAAAAAT TACCGGCAGA GCCTGACTTA CCTTGCCGCA GGGATCCTGA TCGTTTCTGT TACCCTCTAT CTCGCCCTTC CGATCGTGGC ATTATTTCTC CGGATCCCTC CGGATCAGTT CTTTTCCACG CTCCATAACC CTGATGTTAT CAGCGCACTC TGGCTGAGCC TGTTTACCAC TGTGGTCACT CTTGTCGTAG TCATCCTTGT CGGTACGCCA TTTGCGTACT TCCATTCCCG GTACACGTAC CCCGGGAAAG TGATTGTTGA CACCCTCATC GATCTCCCAC TTGTCCTCCC CCCTGCAGTG GCGGGTGTGG CCCTCCTTAT GCTGTGGGGC AGGACCGGGC TCCTTGGAAG GTACTTCAAC ATGTTCGGGA TTACGATTGC CTTTACCACG CTTGCCGTGA TCATGGCGCA GATCTTTGTG GCATCCCCGT TCTATCTCCG GCAGGCAAAA TCCCTCTTCG AGCAGCTTGA CCCGGCATAC GAACAGACCG CACGGACACT GGGGTCTTCA CCCCTTCGGA CCCTTGTCCT TGTTACCCTT CCTATGACTG CAGGAGGTCT GATCTCGGGT GCGGTCATGA CCTTTGGCCG GGCACTTGGG GAGTTTGGCG CTACCATTAT GTTTGCCGGG AATCTCCCCG GGGTAACCCA GACCATGCCG CTTGCCGTGT ACGTGGGTAT GGAAGGGGAC CTTTATGTCG GGCTGACCAT ATCCATACTT CTTGTGATCA TCTCATTTAC CATCATGATC ATCGTGCGTC TGGTCCAGAA ACGGGAGGCG GGCCATGCTT GA
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Protein sequence | MIPHSLRPKN YRQSLTYLAA GILIVSVTLY LALPIVALFL RIPPDQFFST LHNPDVISAL WLSLFTTVVT LVVVILVGTP FAYFHSRYTY PGKVIVDTLI DLPLVLPPAV AGVALLMLWG RTGLLGRYFN MFGITIAFTT LAVIMAQIFV ASPFYLRQAK SLFEQLDPAY EQTARTLGSS PLRTLVLVTL PMTAGGLISG AVMTFGRALG EFGATIMFAG NLPGVTQTMP LAVYVGMEGD LYVGLTISIL LVIISFTIMI IVRLVQKREA GHA
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