Gene Mboo_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0880 
Symbol 
ID5410761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp857113 
End bp858081 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content55% 
IMG OID640868106 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001404041 
Protein GI154150423 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCCATC CCGGAAAAAA AGAGATGATC ATGACACAGG ATATTCCCCG GCTCCTGGAG 
GCGGATCGTG CAGAGATTAC CGTATTGGTT GACAATTACA CGGACATCTT TGTCCCTTCC
CAAAAGTCAG TTGACGTAAG GCCCCCGTTT GCACTTGACC GGCCGCTTCT CGCCGAGCAT
GGCCTTTCCT GTTACCTCAC GATACACGCA AACGGGAAAG AACACAGAAT CCTGCTCGAC
ACCGGCCTTT CCCGCGGCTG TATGCTCCAT AACGCCGTGC AGCAGAAGAT CAATCTTGAG
GGGATTGAGG CGGTGGTGAT CAGCCATGGG CACTTCGATC ACATCGGGGG CCTTATTTCC
CTGCTTCAGA GGGCAGGGCA CCAGGTGCCG GTTGTCCTTC ACCCGGATGC ATTCCTCCGC
CGCCGTCTCA AAAGCCCGGG AAAAGAGCCG ATCGAGCTCC CCGGGCTCGA TCCAATTACC
CTTAAACAGG CTGGCGCGGA TATCCTTGCC CGTCCCGGGC CATCCCTTCT TGCTTCCGGC
CACCTGCTGG TTACCGGTGA GATCGAAAGA ACGGTACCCT TCGAGAAAGG ATTTCCCGGC
ATGGAAGCAT GGATGGGAGA CCAGTGGGTC CCCGATCGGA TAGCAGATGA TCAGGGCCTC
GTGATCAAGG TCAAAGGAAA AGGACTGGTT GTGATCAGCG GTTGTGCCCA TGCCGGAATT
ATCAATACGA TCCGGTGTGC ACAGAAAATG ACCGGAGTCA GTCATATACA CGCGGTAATG
GGCGGGTTCC ACCTGACCGG GCCACTCTTT GCACCGGTCA TTGTCCCAAC GGTTGAAGCC
TTAAAAGAGA TCAATCCGGA TTACGTCATA CCCATGCACT GCACCGGATG GGATGCCATA
AACCGGCTCT CCCGCGAAAT GCCGGAGAGA TGCATCCTCA ATACCGTGGG AACAACATAT
TGTTTTTAA
 
Protein sequence
MCHPGKKEMI MTQDIPRLLE ADRAEITVLV DNYTDIFVPS QKSVDVRPPF ALDRPLLAEH 
GLSCYLTIHA NGKEHRILLD TGLSRGCMLH NAVQQKINLE GIEAVVISHG HFDHIGGLIS
LLQRAGHQVP VVLHPDAFLR RRLKSPGKEP IELPGLDPIT LKQAGADILA RPGPSLLASG
HLLVTGEIER TVPFEKGFPG MEAWMGDQWV PDRIADDQGL VIKVKGKGLV VISGCAHAGI
INTIRCAQKM TGVSHIHAVM GGFHLTGPLF APVIVPTVEA LKEINPDYVI PMHCTGWDAI
NRLSREMPER CILNTVGTTY CF