Gene Mboo_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0822 
Symbol 
ID5411501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp798599 
End bp799201 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content58% 
IMG OID640868047 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001403983 
Protein GI154150365 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.166674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.581812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG CGAGCAAGCC CCCGGTCCCT GAAGGGGCAG AGGATCTCGA GCGCCAGGGA 
ATTGTGGTCC TGATAACAAC CCTGCGGGAC GATACCGACC CGGCTGTCAG GAGATATGCT
GCATATCTGC TGGGAAGGTC AAAGACCCCC GGGAGCATCA TGCCCCTGAT CGCCGCGCTG
GGAGATGACG ACAAATCCGT ACGCGAGCAG GCGATGCTTG CACTTGTTGC AACAGGGAAA
GCTGCAGTCG AACCTCTTAC CGAGTCAATG AAAGATCCCA AATGGGAGAC ACGTTACCGT
GCGGCTGAGG CACTGGGGAA GCTTGCCGAT GAAAAAGCCG TAAAACCCCT TCTCCGGGGA
CTCCATGACA ACCGCGATCA CGTGCGATAC ATGGCAGCAA AAGGGCTGGC CGTGGTGGGA
GACTCCGATG CCGTGGATCC GCTCATTATC CTCTTAAAGG ACGAGAACCC CTTTGTGAGG
ACGATGACGA CACGGGCGCT TGCTGCGATC GGGGGAACGA AAGTCCACAC AGCGATCCGT
GCGGCCCTTG CAGAAGAGAA AAACGAGCAG GTCCGGGCTG CAATGAATGA GGCGCTGCAA
TAA
 
Protein sequence
MTDASKPPVP EGAEDLERQG IVVLITTLRD DTDPAVRRYA AYLLGRSKTP GSIMPLIAAL 
GDDDKSVREQ AMLALVATGK AAVEPLTESM KDPKWETRYR AAEALGKLAD EKAVKPLLRG
LHDNRDHVRY MAAKGLAVVG DSDAVDPLII LLKDENPFVR TMTTRALAAI GGTKVHTAIR
AALAEEKNEQ VRAAMNEALQ