Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0795 |
Symbol | |
ID | 5411578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 765626 |
End bp | 767002 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868019 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001403956 |
Protein GI | 154150338 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0670898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTCCG TGCTGATTAT CGACGACGAG GAAGAAGTTC TCTCCGTCAC CCGGATGTTT TTGGAACGGT TCGGCGACAT GAAGGTGGTG ACCTCGGGAT CTGCAAAAGA CTCCCTTTCC CTCTTAAACA ACCAGACCTT TGATGCGATC ATTGTTGATT ACGATATGCC CGAGATCAAC GGGATCGAGT TTTTAAAAAT CCTCCGCTCC AAGGGGGATG CGACACCTGT TATCATCTTT ACCGGGGTAG GCCGGGAATA TGCAGCCATC GAGGCGCTCA ACAACGGCGC GAACTTCTAC TTAAAAAAAG GCGAGGAGAT CCAGCCCCAG CTCCGCGAAA TGGTTCATAT GATCCGGCGG GCAGTTGAGG GAAAGGTGGT GGGAAAGGGC ATTGGCACTA CCCAGAAGAT CTTAAGCGAC GCAGTCCGGT TTATCTCCGA ACCTGCATTT GCCCTGGACC GCGACGGCAA GGTGATCGCC TGGAACCATA GTATGGAGAT GTTCTCGGGG GTTGCCGCGG CAGACATGGT GGGTAAAGGG GATCGCGTGT ATGCCGTTCC CTTCTTTGGC CGCAAAGTGC CGCTTCTTGT TGACATGGTT TTTGAGGATG AACATGTTAT CCGGAAGAAC AACTTCTCCA TTATCTCAAA GGAGGAAGGC ACGATCCTTG CCTGGGCAAA GGCGCCGGCA AAGGAGGGTG GCGAGCGGAT CCTCTGGATG AAGGCCACGC CCCTGTACGA CGGGCGGGGG ATCTTTGTGG GGATCATCGG GGCCATCCGC GATATCACCC ATTCCGTGGG TACCGATCTC CTCCTCCAGA AAGAAGAAGA GAGTTCCGGG AAGGTGGAGA AGGTGGATGT CCCCACCGGG CAGGGCAAGA TGTTTGACCG GCTGCTCGGG AAGTCCAAAT CCAACTACCA GGAGGGGCTC CGGCTCTATT ACCGGGAGGG GAAGTACGAG GAGGCGATTG CTGCCTTTGA CCGGGCACTC GAGATCGAGC CCTCGCATGC ATGGGCCTGG CACGACCGGG GAGTCTGCCT GAGGGCTCTG GAGAGAAACG AGGATGCCCT TGCTTCCATC TCAAAGGCGC TCGAACTCTC CCCGTCCGAT GAGGAGATCC TCTTTACCTG CGGAGCAACC CTCCAGAAAC TGGGAATCCT CCGGGACGAC AACCAGATCC TCTCGGCGGC AGTCGACGCC TACAACCAGC TGCTGGACAA GAACCCGTCC GATGCCGATG CCTGGAACAA CATGGGGATC TGCGTCCAGG CCATGGGCCG GGACGATCTC TCCCGGCAGT ACTTTGAGCG GGCAAAGGAT CTCCGGCGCT ATAATAAGGA GAAGATCCGC CGGCGCAATC TGGAATCCCT GGTCTGA
|
Protein sequence | MLSVLIIDDE EEVLSVTRMF LERFGDMKVV TSGSAKDSLS LLNNQTFDAI IVDYDMPEIN GIEFLKILRS KGDATPVIIF TGVGREYAAI EALNNGANFY LKKGEEIQPQ LREMVHMIRR AVEGKVVGKG IGTTQKILSD AVRFISEPAF ALDRDGKVIA WNHSMEMFSG VAAADMVGKG DRVYAVPFFG RKVPLLVDMV FEDEHVIRKN NFSIISKEEG TILAWAKAPA KEGGERILWM KATPLYDGRG IFVGIIGAIR DITHSVGTDL LLQKEEESSG KVEKVDVPTG QGKMFDRLLG KSKSNYQEGL RLYYREGKYE EAIAAFDRAL EIEPSHAWAW HDRGVCLRAL ERNEDALASI SKALELSPSD EEILFTCGAT LQKLGILRDD NQILSAAVDA YNQLLDKNPS DADAWNNMGI CVQAMGRDDL SRQYFERAKD LRRYNKEKIR RRNLESLV
|
| |