Gene Mboo_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0782 
Symbol 
ID5411917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp752895 
End bp755084 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content57% 
IMG OID640868006 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001403943 
Protein GI154150325 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.15545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.515162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCGG CGGGTATATC ACAGCGAACT ATCCTCATCA CCGCGGTCAT CATCCTTTCT 
TTCGCCGCAC TTGCCGGGGG GGCATACTAT TTTTTGGCCG CCGGTGCCCC GCCCGGGACC
GGAGGCCCCG GGACAACACC GGTAACCCCG GTCACGCTTT CCCCCGATGA GCAGCGCTGG
ATCGCCCAAC ACCCGGTCGT TGTGGTCTGT CCTGATCCAA ACTACCCTCC CTTTGAATTT
TACGACCAGA CAGGAAACTA TTCCGGCATT TCTGCGGACT ATCTCCACCT GCTCGCACAA
AAGACCGGCC TCAACATCAC CGATACCCGG CAGGATAACT GGTCGGTCTG CGTTTCCATG
ATACAGGCCA ACCAGAGCGA TCTCCTGGGC GCGGTATATA CCTCGGACCT CCGCACCGGG
TACCTGAACT ATACCCTGCC GCTCTACCAG CCGCCGCTGG TGATCATCAC TACCAGAAAT
GTCACGGGCA TGCTGTCGCT TGATGACTTC AAAGGCATGA CCGTTGCGGC GGTAAACGGG
TACACCTCCT ACGACCTGCT CAAAGAGAAG TACCCCGGTA TCGAGGTCAG GACCGAGCCC
GACATCCGGA CCGGCCTCCT GGATGTTTCG CTGGGGAGGA CGGATGCCTA CCTGGGCGAT
CTCCCGACCG CGAGCTGGTA TATCGAACAG GGGGGTCTTT CCAACCTGCG GGTTGCCGGG
GAATACGTGC CGCCCGATCC AACGCAGTTC CAGCTTGCCA TCGGTGTCCG GGCAAATGAA
CCGGAACTGC GCGATATCCT CAACAAGGCA ATCCTTGCGA TCACCCCGGA AGAGAGAACA
CAGATCGCCA ACCGCTGGAT CCCGCAGGAG TTCCAGACGT CCCCGTTCGA TACCCGGATA
ATCTGGGCCA TTATCTCCGG CGTTGTTCTC CTTTTTGTTA TAATCGGTAT CATCATCCTC
TGGAACAACA CCCTCCGCCA TGCGGTGGCC CAGAAGACCC GGGAACTCTC AGAGGAACTC
TCCGAGCGGC GCAGGACCCA GGAGTTGCTC CGCGAGAGCG AACGGACCTA CCGTTCGATC
TTAGAGGATA TCCAGGACGT GTTCTACCGC ACCGACCCGG ACGGGAACCT GGTAATGCTC
TCGCCGTCGG GAATAAAACT CTTCGGCTAT ACCTCCGCAG ATGAGATTCT CGGGAAAAAC
ATCCGGGACA CGCTCTATGC GGATCCCGGG GAACGGGAAA GTGTCCTTGC CGCGATCCGG
AAGAACGGAT CCGTTCAGGA CTATGACATC ATGGCAAAAA GGAAGGACGG ATCCGTTATC
GCGGTCTCCA CCACAAGCCA TACCTATCCT GCGCCCGACG GCACACTGGC GGGCATCGAG
GGGATCATCC GGGACATCTC ACAGCGCAAG GGGTTCGAGC AGGAACTGGT CAGGAAAAAC
GAGGAGCTTT CTGGGGCACG GGAGCAGCTG CTGTCAGCGC AGGCAGAACT CAAAGAGAAC
TTCAACCGGC TCAAAAAGAA CCAGGCCGCG CTCGACCTGG CCAGAAAGAA ACTTAATTTC
TTTAACACGA TCACCTTCCA GAACATCCAG AATGCGATCT TCACCCTCTC GGGATATCTC
GAACTGGAAA AAGAGAGCAC GGATGCAGAG AAGATCCTTG AGTACCACGA GAAGCAGCAC
CGGGTCATAC AGACGATCCT CAGGATCCTC CGGTTTGCCG ACAATTACAA GAACCTGGGG
CTGACTCCCC CCAGATGGCA GGACGTAAAC CAGTCCTTCC TCTTTGCCGT CTCCCATCTC
GATATAAAAA GGATCTCCTG TGTTTCGGAG GTAAGGGGGC TCGAGGTCTT TGCCGATCCC
CTGCTTGAAG AGGTATTTGT GACCCTTGAA GAGAACGTGA TCCAGCATGC AAAAGAGGCC
ACAGAGATAC ACCTCTCCTG CCGGGTTGTC CCGGACGGGC TTGTCCTCAT CTTTTCCGAT
AATGGCCCCG GTGTCCCCGG GGACTTAAAG GAGAAGATCT TCGAGAAGGG GTACGCAGAG
TACCATGACA TGGGGCTGTT TTTTACCCGC GAGATCCTCT CCATCACCGG GATCACAATC
CATGAGACCG GCGAGTACGG GAAAGGGGCC CGGTTCGAGA TCCTTATCCC AAAAGACGGG
TACCGGTTTA CCGGCACGGG CGGGCAATAA
 
Protein sequence
MTAAGISQRT ILITAVIILS FAALAGGAYY FLAAGAPPGT GGPGTTPVTP VTLSPDEQRW 
IAQHPVVVVC PDPNYPPFEF YDQTGNYSGI SADYLHLLAQ KTGLNITDTR QDNWSVCVSM
IQANQSDLLG AVYTSDLRTG YLNYTLPLYQ PPLVIITTRN VTGMLSLDDF KGMTVAAVNG
YTSYDLLKEK YPGIEVRTEP DIRTGLLDVS LGRTDAYLGD LPTASWYIEQ GGLSNLRVAG
EYVPPDPTQF QLAIGVRANE PELRDILNKA ILAITPEERT QIANRWIPQE FQTSPFDTRI
IWAIISGVVL LFVIIGIIIL WNNTLRHAVA QKTRELSEEL SERRRTQELL RESERTYRSI
LEDIQDVFYR TDPDGNLVML SPSGIKLFGY TSADEILGKN IRDTLYADPG ERESVLAAIR
KNGSVQDYDI MAKRKDGSVI AVSTTSHTYP APDGTLAGIE GIIRDISQRK GFEQELVRKN
EELSGAREQL LSAQAELKEN FNRLKKNQAA LDLARKKLNF FNTITFQNIQ NAIFTLSGYL
ELEKESTDAE KILEYHEKQH RVIQTILRIL RFADNYKNLG LTPPRWQDVN QSFLFAVSHL
DIKRISCVSE VRGLEVFADP LLEEVFVTLE ENVIQHAKEA TEIHLSCRVV PDGLVLIFSD
NGPGVPGDLK EKIFEKGYAE YHDMGLFFTR EILSITGITI HETGEYGKGA RFEILIPKDG
YRFTGTGGQ