Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0738 |
Symbol | |
ID | 5410996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 703668 |
End bp | 704201 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640867959 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001403899 |
Protein GI | 154150281 |
COG category | [K] Transcription |
COG ID | [COG4800] Predicted transcriptional regulator with an HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0931337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.163713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATATG CGGACCCGGT TGACCGGCTT ATGCGCGCAG CGCTCACCTC CGATGAGGCA TTCGTGGCTA CCTTAAACGA TCTCATGGAA AACGACCTGC GCATCAGCGT CCGCGATCTC TCAGAGCACT GCGGAATCGC CCAGAGCTCG CTGTATAAGA TCATCAACGG GAAACGTTCA CCCAATCTAT CCACTCTCCG GGAGATTGTA AAAGCCCTGC GGCAGTTCTA CCACGCAGGG GATGAGAAGT TCATCGGCCT GATCGCGGCC CGGCCGGTGC TCGAGAGCGT GGAAGAGCGG CTCGCGGATG TGGATGGCCG CCCCCTCAAG GTGCGGGAGT ACCCGGTGTA CACCATGGAG GATGCCATTG TGGCTGCAGT CCGGGCCGAG CGGGAAGGGG CGATTGCAAT CGTCTGCGCC CCGATTGTCT CAAGCATCAT CGAGCAGCTG GTCCATGTGC CGGTAACTAC CATCATCCCG CGTGAATCGG TCCAGCGGGC GATTGAACTT GCGGCCCGGA AGGCGTGGAT TTAA
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Protein sequence | MAYADPVDRL MRAALTSDEA FVATLNDLME NDLRISVRDL SEHCGIAQSS LYKIINGKRS PNLSTLREIV KALRQFYHAG DEKFIGLIAA RPVLESVEER LADVDGRPLK VREYPVYTME DAIVAAVRAE REGAIAIVCA PIVSSIIEQL VHVPVTTIIP RESVQRAIEL AARKAWI
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