Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0654 |
Symbol | |
ID | 5410046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 621075 |
End bp | 621920 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640867873 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_001403815 |
Protein GI | 154150197 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGG TAAAAGTTGG CGTGCATGTC TCCATTGCCG GCTCGCTCGA TCTCGCGGTT GACCGGGCAA AAGATGCAGG CTGCGACGTT TTCCAGATGT TCTCCCGTAA TCCCCGGGGA TGGGGATACA AACCCCTGTC CGAGGGAGAT TGTGATCTCT ACAAAAAGAA GATCGCAGCC ACCGGCCTCC TCCCGGTTGA CCATATGCCC TATCTTCCGA ATCTGGCCTC GCCAAAAACG GAGATCTGGG AAAAGTCCGT CCAGACTCTG AATGCCGAGC TTGACCGGTG CAACAGGCTG GGCATTCCCT ACCTGGTCAC CCATCTCGGC CACCATCTTG GGGACGGGAT TGCGGGTGGC AGGGCCCGGG TCATAAAAGC CATAAATACC GTCCTTGCCT CATCGGAATC GGGAACAATG CTGCTTTTAG AGAATACCGC CGGGGAGAAG AACAGCGTTG GCAGCAGTTT CGAGCACATC GGTGCGATAC TTGCGGGGCT TTCCGATGAG AAAAGGATCG GAGTCTGTTT CGATACCTGC CACGCGTTTG CCGCGGGTTA CGAGCTGCGG ACCAGGGAGG GAATTACCTC CACCCTTGCA CAGTTCGATG AGCAGGTCGG GATTTCCCGT CTTCGCGTTA TCCATCTCAA CGACACCAAA GGTGATCTCG GGAGCGGCCT AGACCGGCAC GAGCACATCG GGATGGGGTT TATTAGTGAA GACGGATTCC GGCACATCCT GCACAACCCG GTCTTTGCGC GCCTCCCGCT TGTCTGCGAA ACACCGGTGG ACGAACGAAG GGATGATCGC GGCAATATCG CAAAGGTCCG TGAACTGGCC GCCTAA
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Protein sequence | MAPVKVGVHV SIAGSLDLAV DRAKDAGCDV FQMFSRNPRG WGYKPLSEGD CDLYKKKIAA TGLLPVDHMP YLPNLASPKT EIWEKSVQTL NAELDRCNRL GIPYLVTHLG HHLGDGIAGG RARVIKAINT VLASSESGTM LLLENTAGEK NSVGSSFEHI GAILAGLSDE KRIGVCFDTC HAFAAGYELR TREGITSTLA QFDEQVGISR LRVIHLNDTK GDLGSGLDRH EHIGMGFISE DGFRHILHNP VFARLPLVCE TPVDERRDDR GNIAKVRELA A
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