| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0643 |
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| Symbol | |
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| ID | 5411465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 609617 |
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| End bp | 611743 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640867862 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001403804 |
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| Protein GI | 154150186 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.948489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAC CGGGGTCGTG GCAGAGAATA TCGATCAGGA CAAAGATTCT GATTGTTTTT
TTATCCCTCT CCATGGTCGC ACTCGGTATC CTCGGGTACG CTGCTTTCTC GACCATGAGC
GACATGGGGT CATATGCCCT TACGAGCAGC GGGCAGCTGG GTGATCGTGC GGTATCCGAC
AGCACCACAG CCCTTGAAGC AAATGCCGAG GCCTCGCTTG TGCGGCTTGC AACCGACCAG
GCCGATATAA GTAACGTTGT CTTTTCCCAG GTTGACGGGG AGATGGATAC GCTTGCCGGG
TATGCAGCAA CTGTCAGGGC CGGACCTGCC ACAACCCGTC CGCTCTATGA CCAGTCAGAG
CGCCCGCAGG ATCCCGGTTC TTCCTCGGCA TATGTCCTCT CTCCCGGTGT CACCAGGGCT
GGTGTTGAAA ACGAACTCTA TTCCCTTGCT TCGCTTGATG ACGTGATGGG TCCGATGCTT
GCATCGGATC CCCGGATCAC CCAGATCTAT GTTGGCACGG GAAGCGGTAT CCTGTATGTC
CATCCGTGGC TCAATACAAT CCCCTCGTCG TACGATCCCC GGACCCGGGA CTGGTATATC
CGTGCGGTGC AGTCCGGTGA TCTTTCCTGG TCCGACCCGT ACATCGATGC TTCCGGCAAG
GGCCTGATGG TCACCTGTTC GCGGCCGGTT CCTGCCTCCA CCGGGAACTC CACCTGGGTC
GTTGCCGCCG ATGTCACCCT TTCTACAGTG AATGCGGAGA TCATCAATAC GCAGATCGGG
GACCAGGGAT ATGCCATGCT GATCGATGAC CGGGGCAATG TCATTGCACG CCCGGGAATC
TCTGCAGGTG AGAAAGGGTG GGATGAATCG TTTGAGATGG AAAATCTCCT GACAAGCAAT
AACTCCGCTC TTGCTGCTGT TGCACAGAAT ATGATGGCCG GCCAGACCGG TATCGCCCGG
GTACCGTTTA GCGACGGGGA AAAGTACGTT GCCTACGCCC CGGTAAAGAG TGTCAACTGG
AGCGTTGCCC TTGTTGTGCC GGTGGATGAG GTGATTGCCC CGGCAGAAAA TACCCGGGGG
CAGATCGTCA ATGCTACCAG TGATACCGGG GTTCACTTAA ACCAGACGAT GAACTCGGCA
AAAGGTCTCT TTATCGCCCT TTTTGTCCTG CTCTTTGTCA TGGTTGCGGG TCTGTCCGTT
CTCTTCTCTC AGGTAATCAC CCGCCCGGTT GCGGCGCTCA AGCGCGGCTC TGAAGCAATA
GGTGCAGGGG ATCTCGGGTA CCGGGTTGAG ATTCACACCG GGGACGAGTT CGAGGACCTT
GCACATTCGT TCAATACGAT GGCTGCCGAT CTCAAGGAGC ACATGGACGA ACTGGAGCGG
ACCACTGCCG AAAAAGAACG GTTTGCAAAG GAACTTGAGA TTGCCAAGGG GATCCAGCAG
AGTTTCCTTC CGGATACCGC ACCGGACATT GCCGGCATCG AAATAGCAGC AAAAAATATT
CCTGCCCTTG AGGTTGGCGG TGATTTCTAC GATTTCATCC CGCTCGGGAA GGACCGGTGG
GGCCTGGTGA TCGCTGATGT CTCCGGCAAA GGTGTGCCCG CCGCGCTCTT CATGGCATTG
TCCCGTACCC TTATCCGGGC AAGTACCCTC GCAAATGCAG ACCCGGCGGT GGCGATCGGG
CATGCAAACC AGCTGATCTG TGAGGATTCA AAGACAGACA TGTTTGTCAC GCTCTTCTAT
GCGATCCTTG ATTCCCGCGC AATGACGCTT GATTATGTGA ATGCCGGTCA CAACCCTCCC
CTGCTTCTCA AGGGGACCTC GTCGGATGTC GTCCTCCTCA AAGCCCGGGG CATCGCGCTT
GGGTTAACCG ATGAGATGGA TCTCCAGTCT GCCAGGATGG ATCTCCGGCC CGGCGATGTG
CTCGTGCTTT ACACGGATGG CGTGACCGAA GCAATCAACG ATCATGAAGA GGAATTTGGC
GAGCAGCGCC TTCTTTCCGT TATCATGGAG AACCGCACAC TTCCTGCCGC AGAACTGCTC
GAGAAGATCC TTAATGCTAT CAGTACATTT GCCGGCAACC GCCCCCAGCA TGACGATATC
ACGCTTTTGA TCCTGCACGC TGTATAA
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| Protein sequence | MRIPGSWQRI SIRTKILIVF LSLSMVALGI LGYAAFSTMS DMGSYALTSS GQLGDRAVSD
STTALEANAE ASLVRLATDQ ADISNVVFSQ VDGEMDTLAG YAATVRAGPA TTRPLYDQSE
RPQDPGSSSA YVLSPGVTRA GVENELYSLA SLDDVMGPML ASDPRITQIY VGTGSGILYV
HPWLNTIPSS YDPRTRDWYI RAVQSGDLSW SDPYIDASGK GLMVTCSRPV PASTGNSTWV
VAADVTLSTV NAEIINTQIG DQGYAMLIDD RGNVIARPGI SAGEKGWDES FEMENLLTSN
NSALAAVAQN MMAGQTGIAR VPFSDGEKYV AYAPVKSVNW SVALVVPVDE VIAPAENTRG
QIVNATSDTG VHLNQTMNSA KGLFIALFVL LFVMVAGLSV LFSQVITRPV AALKRGSEAI
GAGDLGYRVE IHTGDEFEDL AHSFNTMAAD LKEHMDELER TTAEKERFAK ELEIAKGIQQ
SFLPDTAPDI AGIEIAAKNI PALEVGGDFY DFIPLGKDRW GLVIADVSGK GVPAALFMAL
SRTLIRASTL ANADPAVAIG HANQLICEDS KTDMFVTLFY AILDSRAMTL DYVNAGHNPP
LLLKGTSSDV VLLKARGIAL GLTDEMDLQS ARMDLRPGDV LVLYTDGVTE AINDHEEEFG
EQRLLSVIME NRTLPAAELL EKILNAISTF AGNRPQHDDI TLLILHAV
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