Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0612 |
Symbol | |
ID | 5411126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 578246 |
End bp | 580168 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640867831 |
Product | peptidyl-arginine deiminase |
Protein accession | YP_001403773 |
Protein GI | 154150155 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase [COG2957] Peptidylarginine deiminase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.778419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAGA CTACCCGTAC CATTGCACTC ATCCAGATGG AGATCGGACC GGATCCGGAC AGGAACCTCA ACGAGGCACG TGAGCGTGTG GAAAAAGCGG CGCAAAACGG GGCACAATTT ATCTGCCTTC CCGAACTCTT CCGTACCCGG TACTTTCCCC AGCAGATCGG CACTCCCGTA CAATCGCTTG CAGAGACGAT CCCCGGCGAA TCAACTGACG TATTTACCCG GATTGCAAAG GAGTACAAGG CAGTTATCAT TGTCCCGGTC TTTGAACGAT CTCCCCTGGG TCACCTGGAG AACGCGGCAG TTGTTATCGA TGCCGACGGC AGTCTCCATG CGCCCTATTA CAAGGTCCAT ATCCCTCAGG ACCCGAAATT CTTTGAAAAA GGGTATTTCT ATCCCGGCAA CCACTATGCC GTGCATGCCA CCCGGTACGG GAAGATCGCC GTTCTTATCT GCTACGACCA GTGGTTCCCC GAAGCGGCAC GGTGCGTCTC CCTTGAGGGT GCGGAGATCA TCTTCTACCC GACGGCGATA GGGAATCCCT GCACCGAACA ACCCTCCGAA GGGGACTGGC AGGAGGCATG GGAGATCATC CAGCGCAGCC ATGCTATAGC AAACAGCGTG CATATTGCCG CTGTCAACCG TGCCGGCGGG GAAGGAAACA TCCGGTTTTT CGGGGGATCC TTTATCTGCG ACGCATTTGG GAAAGTGCTG GCCCGGGCCG GCGATGCAAA CGAAACGATC ACGGCTACGG CAGACCTGGA GCTAAATGAA TCGATCCGAG ACTCCTGGGG ATTTTTCCGG AACCGCCGCC CGGACACGTA TGGCGCCGTC TGCGCACGGG TACCTGAACA CGATGCAACG GCACCCATTC CCCGCAAAGG GGATACGCCG AGAAAGCTGG GGTATTCCAT GCCCGCCGAA TGGGAACCGC ATGAGGCAGT CTGGCTCTCG TGGCCGCACA ACAAATTCAC CTTTCCCGAC CTTGACAGGG TTGAGGAGGC ATACATCCGG TTCATTGCCG GGATAGCCCC TTCGGAACGG GTGGAACTCT TTGTTCCCAC ACCCATGGCA AACAGGATGG TAAAGGCACG CCTCCGTACT GCCGGGGTAG ACCTGTCCCG GGTGACGCTG CGGACGATCC AGTATGCCGA TGTCTGGATC CGCGATTATG GCCCGACGTT CGTGGTAAAC CCGGCGCTGA AACGGTCGGC AATGGTGCAC TGGAGGTTCA ATGCCTGGGG AGAGAAATAC CCGGACCAGA TCGCTGACGG GCATGTTCCC GATGACATGA ACCGGTGGCT TGGCCTGCCC GTCTTTACAC CGGGCATTAT CCTTGAAGGA GGATCGATCG ATACCAACGG GCGGGGCACG GTGCTGACCA CGCAGGCCTG CCTCTTAAAC CGGAACCGGA ACCCGGAGCT CACCAAAGAC GAGATCGAGG AATATCTCAA AGAATACCTT GGCGTAGTAA AGATCCTCTG GCTCAACCGG GGAGTGGCCG GCGATGATAC GGACGGGCAT GTTGATGATA TTGCCCGGTT TGTCTCTCCC ACCACGATCG TCTGTGCCTA TGAGGAAAAC CCGAAGGATG AAAATTACGC TGCACTCAAC GAGAATTACG AGATCCTCCG GGCTGCAACT GACCAGGAAG GCAACCCCTT TACTATTATA AAACTCCCCA TGCCGGCCCC GGTAATGAGC GAGGAAGACC GGTGCCCGGC CAGTTACACG AATTTCTACA TCGGCAATAC CGTGGTCATT GTCCCGGTCT TTGATGATCC CCAGGACAAA GAAGCGCTCC GGATCCTCCA GGAACTTTTC CCGGACCGGA CGGTCATGGG AGTAAATGCC CGGGCCATGG TGGAAGGGTA TGGAACCTTC CATTGCGCCA CCCAGCAGCA GCCCCGGACA TAA
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Protein sequence | MPETTRTIAL IQMEIGPDPD RNLNEARERV EKAAQNGAQF ICLPELFRTR YFPQQIGTPV QSLAETIPGE STDVFTRIAK EYKAVIIVPV FERSPLGHLE NAAVVIDADG SLHAPYYKVH IPQDPKFFEK GYFYPGNHYA VHATRYGKIA VLICYDQWFP EAARCVSLEG AEIIFYPTAI GNPCTEQPSE GDWQEAWEII QRSHAIANSV HIAAVNRAGG EGNIRFFGGS FICDAFGKVL ARAGDANETI TATADLELNE SIRDSWGFFR NRRPDTYGAV CARVPEHDAT APIPRKGDTP RKLGYSMPAE WEPHEAVWLS WPHNKFTFPD LDRVEEAYIR FIAGIAPSER VELFVPTPMA NRMVKARLRT AGVDLSRVTL RTIQYADVWI RDYGPTFVVN PALKRSAMVH WRFNAWGEKY PDQIADGHVP DDMNRWLGLP VFTPGIILEG GSIDTNGRGT VLTTQACLLN RNRNPELTKD EIEEYLKEYL GVVKILWLNR GVAGDDTDGH VDDIARFVSP TTIVCAYEEN PKDENYAALN ENYEILRAAT DQEGNPFTII KLPMPAPVMS EEDRCPASYT NFYIGNTVVI VPVFDDPQDK EALRILQELF PDRTVMGVNA RAMVEGYGTF HCATQQQPRT
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