| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0549 |
|---|
| Symbol | |
|---|
| ID | 5412243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 526324 |
|---|
| End bp | 527064 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640867768 |
|---|
| Product | ribosomal protein L32e |
|---|
| Protein accession | YP_001403710 |
|---|
| Protein GI | 154150092 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1717] Ribosomal protein L32E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0692327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.362296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTG AAACCAAGCG ACTGATCCGT GTGCGCACCG AGAAGGGTGC CGTCTTCAAG
CGCCACGGGT TTGGTACAAA ACCACAACTC TCCGATTCAT GGAGAAAGCC CCGTGGACAG
CACAACAAAC AGCGAGAGCA AAAAAAGGCT AAGGGAAATC TTCCCAAGCC CGGCTTTGGC
AGCCCGATTG CGGTGCGCGG CATGCACCCC AGTGGGTTTT TTGAAGTGCT GGTCTTTACG
GAAAAGGATC TCGAAAACCT TGACGTGAAA ACCCAGGCGA TCCGGATATC AGCCGGCGTC
GGGGCACGCA AGCGCAAGGC CCTCCAGGAG AAGGCCGCCG CGTCGGGTAT CAAGATCCTC
AACGCCCGCG TGATCAAGGA ACGCGTTGCC GAAGAAAAGC CGGCTGAGCC GGCAAAAGAA
GCGGCAAAGG CAAAGAAGGA CGCAAAGGAA AATCCGGCAA AGAAGAGTGC TTCCAAGGTG
ACCTCCTCAA AAAAGAAAGG CACCGAAGAG AAGAAGCCGG TGAAATCTGC CCCATCCAAG
GCCAAGCCTG CAGCAAAGGA AACTGAAAAG AAGGCAGAAA AAGCCGAAAA GCCCAAGGCA
AAGGAATCTG CAAAGGCACC TGCCAAAAAG CCCGCGGCAA AAGAAGCCGA AAAGAAGCCT
GCCACAGCTG CAAAGAAATC CCCGGCAGAG AAGACCGCTC CCAAGAAAAA GTCCTCGTCA
GGAGTGAAGA AGAATGAGTG A
|
|---|
| Protein sequence | MTTETKRLIR VRTEKGAVFK RHGFGTKPQL SDSWRKPRGQ HNKQREQKKA KGNLPKPGFG
SPIAVRGMHP SGFFEVLVFT EKDLENLDVK TQAIRISAGV GARKRKALQE KAAASGIKIL
NARVIKERVA EEKPAEPAKE AAKAKKDAKE NPAKKSASKV TSSKKKGTEE KKPVKSAPSK
AKPAAKETEK KAEKAEKPKA KESAKAPAKK PAAKEAEKKP ATAAKKSPAE KTAPKKKSSS
GVKKNE
|
|---|
| |