Gene Mboo_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0512 
Symbol 
ID5411332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp493425 
End bp494294 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID640867728 
Producthypothetical protein 
Protein accessionYP_001403673 
Protein GI154150055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.269332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGTC AGAAATGCGG AAAGGAGAAT CCTGACAACG CCGCGTTTTG TAATTCCTGC 
GGTGCGGATC TCCGTTCGGC ACCGGTTGCA CCAATCCCCC AACCAGAAAC GATCATATCG
TCATGTTCTG CCGGAAAAAG ACGGAAAATT ATATTATATG GGGTAATTGT TTGTATCGTC
GTCGTTATAC TAATTGCGGG CGCAATATCT CTCTGGAATA ACCAAGATTG GAATTCATAT
TGTTCCAAGA ATTATCCCGG TAGCACGTAC AATTCCACAA CTAACACTTG CGAAAACCCG
GCGGCATCAA CGATACCATC ACCCGCACAA ATTGGGCCGC ATGCAGCTCC AATATACCAA
AGAGGGGATA TAGTTTCGAC TGATAATGAG GGCGGGGGCG GAACTCTTAT CGAGGGATAT
AATCCAGCAA ACGATACTTA CGTTGTTACA TGGGTGGATC AGAGTTTAGA TGGGACTTGG
TATCACGGGA CAGATCCGAC TATTTATGCG GTTGATTCAT GGGATAGGGT AGATCTTGAA
AACAAAAACC CTTATAAAAT CGGTACGGTA GATCCAAACA ATTTGCCATC CTACGCCTCA
AGTGCTCCCC TAGTTCTGAC CGGGAATGGA GACAACATTA CGGAATTTGG CACGCCGCAG
TCGGGAGCGT ATATATTTAC AAGCACATAT TCGGGACAGG GAAATTTCGT AGTTTGGATT
AAGGATAGTA ATGGATATGA GGTTGGTTTA GCTGCAAATA CTGTCGATGC GAGTACTGAT
TCGAAAATGG TGCATCTGGA TACCGATACA TATTACGCAG AAGTAACTGC AAACGGCCCA
TGGACTTTAA CAATAACACC ACCATCATAA
 
Protein sequence
MFCQKCGKEN PDNAAFCNSC GADLRSAPVA PIPQPETIIS SCSAGKRRKI ILYGVIVCIV 
VVILIAGAIS LWNNQDWNSY CSKNYPGSTY NSTTNTCENP AASTIPSPAQ IGPHAAPIYQ
RGDIVSTDNE GGGGTLIEGY NPANDTYVVT WVDQSLDGTW YHGTDPTIYA VDSWDRVDLE
NKNPYKIGTV DPNNLPSYAS SAPLVLTGNG DNITEFGTPQ SGAYIFTSTY SGQGNFVVWI
KDSNGYEVGL AANTVDASTD SKMVHLDTDT YYAEVTANGP WTLTITPPS