Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0501 |
Symbol | |
ID | 5411800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 482243 |
End bp | 483535 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640867716 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | YP_001403662 |
Protein GI | 154150044 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGGA ACCGATCTAC GCGTGGCAGC CCTGATCCGG GCGATCTGTT TGCCGGTCTT GCCGGCAAAC GGGTGTATAT CGAGACCTAC GGGTGCCGCT ATAACTTCGG CGACACGGCG AATCTGGTTG CCGTCCTTAA GCACTACGGA AGTACCGTTG TCCCTGCCCC GGAAGACGCG GATGCGGTCG TGGTCAATAC CTGCACGGTG GTCGGTCCTA CGGAACGGCG CATGCTCCGC CGCCTTTCTG CATTGCAGGA GAAACCGCTT TTTGTTACCG GCTGCATGCC GCTTGTCCAG CGCGAAGCGA TCCTTGCGGT CTGTTCACCG GTTATTATTC ATCCGGATAC GATCCGCGAA GCCTCCCGGG CCCTTATGAC CGTTGGCTCC GAAAGCGTAG GGATCGTCCA GATTGCCCAG GGCTGCCTTG GGCGGTGCAC CTACTGCATC ACGCGCAGGG CCCGGGGGCC TCTCAGGAGT TTCCCTGTCC AGGAGATCCG AAATAAAATC GAAGAATATG TCAGGGCTGG CGCATACGAG ATCCAGCTGA CCGCACAGGA TACCAGCGCA TGGGGACGGG ATACGGGGCA GCGCCTGCCG GATCTGCTTA CCGCTCTCTC TTCCATCCCG GGAAATTTCC GGCTCCGGGT CGGAATGATG AACCCGGCTA CTACCCTGGG TATCCTTGAC GATCTGATCG ATGCCTTTGC CAGCGATCGG CTCTTCCGGT TCGTGCACCT GCCGGTCCAG TCGGGATCCG ATCGCATTCT CGAACAGATG GGGCGGGGCT ATACGGTCCG GGAATTCGAG GAGATCGTCT CTGCATTCCG CGGGCGATAC CCGGATATCT CCATTGCAAC CGATTTCATC GTAGGGTTCC CGGGGGAGAC CGAAGAGGAC TTCTCCCGAT CCCTTGAGCT GATCGGGCGG ATCCGGCCCG CCAAGGTTAA TGTGACACGA TATTCGCCGC GGCCGTTCAC CGGGCCGTTT GAGGAAAAGG ACTTTCCGGA TGCAGTAAAA AAAGATCGCT CCCGTATTCT GAACGCGTAC GCGGAGGAGC AGTATGTCGC ACTCAACCGT CCTCTTCTCG GGACTATGGT CTTCTGCGTA GTCACCGAGA AGATCCGGCC CGGCTCGGTC ATGGCCCGGA CCGCCTCGTA CCAGGGCCTC GTCATCGGTG AGGAGCTGTC TGTCGGGACT GCTGCAGTTG TCCGGCTCAA AAAAGACCGG AAGTACTTCT TTATGGGGGA TCTCCTCTCC CGGGATCCAT CTCATATGCG GGGGGTCGAT TAA
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Protein sequence | MDGNRSTRGS PDPGDLFAGL AGKRVYIETY GCRYNFGDTA NLVAVLKHYG STVVPAPEDA DAVVVNTCTV VGPTERRMLR RLSALQEKPL FVTGCMPLVQ REAILAVCSP VIIHPDTIRE ASRALMTVGS ESVGIVQIAQ GCLGRCTYCI TRRARGPLRS FPVQEIRNKI EEYVRAGAYE IQLTAQDTSA WGRDTGQRLP DLLTALSSIP GNFRLRVGMM NPATTLGILD DLIDAFASDR LFRFVHLPVQ SGSDRILEQM GRGYTVREFE EIVSAFRGRY PDISIATDFI VGFPGETEED FSRSLELIGR IRPAKVNVTR YSPRPFTGPF EEKDFPDAVK KDRSRILNAY AEEQYVALNR PLLGTMVFCV VTEKIRPGSV MARTASYQGL VIGEELSVGT AAVVRLKKDR KYFFMGDLLS RDPSHMRGVD
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