Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0402 |
Symbol | |
ID | 5411418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 387729 |
End bp | 390029 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640867616 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001403565 |
Protein GI | 154149947 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.371468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGGA TCCTCTATGT CGATGATGAA CCCGGACTCC TTGAAATCGG CAAACTCTTC CTGGATAGCA CCGGGGAATT TGACGTAAGT ACACTGACCT CTGCCGAAAA GGCACTGGAG TCTCCTGAGA TCCTGTTATT CGATGCCATC ATATCCGATT ACCAGATGCC CGGGATGGAC GGGATCTCGT TTTTAAAAAA TATCCGGAAG CGTACCAAGG ATGTCCCGTT TGTCCTCTTT ACCGGCCGGG GAAGAGAGGA AGTAGTTATC GAGGCCATCA ACAGCGGGGC AGATTTTTAT CTCCAGAAGG GCGGCCAGCC GACTGCACAA TTCGCCGAGC TGGCACACAA GATCCGGATA GCGATAGAAC GCCGCAGGGC AATAGATTCA GTAAAAGATT CCGAGCAGCG GCTTACCGAT ATCATCGATT TTCTCCCCGA CGCAACCTTT GCGATCGACA CAACGGGAAG GGTCATTGCA TGGAACCGGG CAATGGAACA GATGACAGGA ACCCCGGCTG AAGACATCCG AGGCAAAGGA AATTACGAAG ATGGCATGGC GTTTTATGGA GAACGACGGC CAATGCTTGC CGATCTTCTC CTCAATCCCG ATTTTTCCTT TGAAGAAAAA ACCTATACCA ATGTCAGGCG TGCCGGTACA GGCATCACCG CTGAAGGGCC CGTACAAATC AGGGGAAACT CTCTGCGCTA TCTCTGGGGG ATCGCCGGGC GTCTGTTTGA CAAAGAAGGA AAATGTACCG GGTCAATAGA GTCAATCCGG GATATTACTG AACGCAAGGA AGCTGAAAAA GAACTCCAGG CTGCATATGA ACAGATAGCA GCTGCCGAGG AAGAACTCCG GGGCCAGTAC GAGGAACTGG CCGCCGGTGA CCTGAAGTTA AAAGAGCGGG AAGCCCAGTT ATGGGCAATC TTTAAAGAAG CGCCCCATGC TATCGCCATC TCCGACAGCG CAACAGGAAA ATATCTCTCT GTTAACACGC TCTTTGAACA GGGGTCCGGG CTTGCAGCAT CAGAGATCCT GGGGAAGACC TCTGCTGAGA TCGGTTTTGT CCCCCCGGAA GAACATGAGC TGCTCTTAAA AGAGTTTATC CGGGAAGGTG GCATCCGGCA GAAGCCCCTG ACGGCAAAAA TGTGGGATGG CAGAAAGGCA GATATCCTTT TTACCGCCGT ACCCATTGTC CTGAGCACAA GGACGATCGT CCTTACGATG GTCGTTGATA TCACCGATAT GAAAAGGATC GAGGATGCCC TCCGGAAACA GGAACAGATC CTCAACGATG CGTTTGCAAG CATCAAAGAC GGCATCTCTC TCCTTGATAA GACGATGACG GTCATCCGCG TCAACAAAAC AATGGAGGAA TGGTATTCGC ATGAAATGCC CCTTATCGGC CGCAAATGCT GGGAGGTATA CCATGGACGG GCCGGGCCCT GCGATATCTG CCCCACTCTT CATACACTTA AGGAGGGAAA ACCTGCAAAG GAACGTGTCC CGCTGGTAGA TGCCGGGGAA GTCACCGGCT GGCTCGATCT GTACAGCTAT CCTGTGATCG ATTCAGCTAC CGGTGAGATG ACCGGAGTCA TCGAATATGT ACGCAACGTA ACCGAAGAGA CAAAAGCGCA GAGGGACCTG GAGCTCGCAA ACAAAAAACT CAACCTCCTC TCCTCAACTA CCCGGCATGA TATCCTAAAT ACCCTCACCG GCCTCCAGGG GCTTGTGGAT AAGGCTGCAT CACTGAGCAC AAGCGGGGAA TGCACGCACC TCCTCTCCCA GATCCGGGAC CGGGCCGGTA TTATCCGGCA GCAGATCGAT TTCACCGGAC GCTACCAGGA AGTGGGGGTG CATGCACCAC TCTGGCAGGA CGTTAATGTG CTCCTCTCCC GGATCCTCCC GGCAACTCCC CGTACAAAGG CAGGTATCGT CAATGATTGT GATAACGTGG AGATCTTTTC TGATCCCCTG CTGGAAAAAG TGCTCTATAA CCTTGTTAAC AATGCCCTTA AGTACGGGGG CCCTGACCTT ACCACGGTTC ATATAACCTC AGACCTGTCC GCACCGGAAC TGATCATTGC TGTCGCCGAT GACGGCGTGG GAATAGCAGC CGGGGATAAG GACCACCTCT TCCAGCGGGA GGTTGGCCAG AAGACCGGGT CCGGCCTCTT CCTTGCCCGG GAGATCCTCA GTATCACGGG CATTACGATC AGGGAGACCG GTACCCCGGG AAAAGGCGCC CGTTTTGAGA TTCTCGTGCC GCCCGAAGCC TGGCGGAAAA AGCGGCAGTA A
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Protein sequence | MYRILYVDDE PGLLEIGKLF LDSTGEFDVS TLTSAEKALE SPEILLFDAI ISDYQMPGMD GISFLKNIRK RTKDVPFVLF TGRGREEVVI EAINSGADFY LQKGGQPTAQ FAELAHKIRI AIERRRAIDS VKDSEQRLTD IIDFLPDATF AIDTTGRVIA WNRAMEQMTG TPAEDIRGKG NYEDGMAFYG ERRPMLADLL LNPDFSFEEK TYTNVRRAGT GITAEGPVQI RGNSLRYLWG IAGRLFDKEG KCTGSIESIR DITERKEAEK ELQAAYEQIA AAEEELRGQY EELAAGDLKL KEREAQLWAI FKEAPHAIAI SDSATGKYLS VNTLFEQGSG LAASEILGKT SAEIGFVPPE EHELLLKEFI REGGIRQKPL TAKMWDGRKA DILFTAVPIV LSTRTIVLTM VVDITDMKRI EDALRKQEQI LNDAFASIKD GISLLDKTMT VIRVNKTMEE WYSHEMPLIG RKCWEVYHGR AGPCDICPTL HTLKEGKPAK ERVPLVDAGE VTGWLDLYSY PVIDSATGEM TGVIEYVRNV TEETKAQRDL ELANKKLNLL SSTTRHDILN TLTGLQGLVD KAASLSTSGE CTHLLSQIRD RAGIIRQQID FTGRYQEVGV HAPLWQDVNV LLSRILPATP RTKAGIVNDC DNVEIFSDPL LEKVLYNLVN NALKYGGPDL TTVHITSDLS APELIIAVAD DGVGIAAGDK DHLFQREVGQ KTGSGLFLAR EILSITGITI RETGTPGKGA RFEILVPPEA WRKKRQ
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