Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0338 |
Symbol | |
ID | 5409982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 327706 |
End bp | 329667 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640867553 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001403502 |
Protein GI | 154149884 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.84298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACCG TCCTTTATGT CGATGATGAA CCCGATCTGC TTGAGATAAG CAAACTTTTC CTTGAGCAGA GCGGGCAGTT TTCCGTTGAC ATTCTGCCTT CTGCTCCCGA GGCGCTTGCC GCAATGAAGG TAAAGACCTA TGATGCCATT GTCTCGGATT ACCAGATGCC CGGGATGGAC GGCATCGATT TTTTAAAAAA TGTCCGGGCT TTGGGGGATA CTATCCCGTT TATCCTTTTT ACCGGGAGGG GGCGGGAAGA GGTTGTCATC CAGGCCTTAA ATGAAGGGGC CGATTTCTAT CTCCAGAAAG GCGGGGATCC GACAGCGCAG TTTGCGGAAC TGACCCACAA GGTTCTCCTT GCGATAGAAC ATCGCAGTAA TGCTGAAAAA ATACAGTCCT TAAACCGGCT GTACCTGGTT ATTTCCGCGA TTGACCGGGC AATTGTCCAG CTTCGCACAA AGAGTGAATT CTTATCGGAG GTCTGCAGGA TCCTGGTGGA AACCGGAGGA TTCCGCATGG CCTGGATCGG CATTCCTGAT CCCGGAGAGG GGATAATCAG ACCGGTAGCC TCCGCCGGGC AGGTTGAAGG TTACCTTGAG ATCGTCAGGG TAGCCCTGGA TGATTCAACA CGCGGATGCG GGCCCACAGG GAAAGCGTAC CGGGAAGGGA AAAATTGTAT TTGTAACGAT ATTGTAAGCG ATCCCTGCAT GGAACCATGG CGGAAGGAAG CCCTGAAACG GGGTTACAAC ACCTGTGCTG CATTCCCGTT CGGCCGTGGA TCCAACAACC CCGGGGTCCT GGTGCTCTAT GCGTCAGAAC TCGGGTTTTT CAACGACCAG ATCATCTCCC TGACAAACGA TCTGGTTGCC GATATCGCCT TTGCGCTCGC AACGCTGGAT CACCAGAAAG AGCGGGAATC TGCGATTGCT GCCCTCAGGG AGAGTGAAGA AAAATACCGG CTTGTTGTTG AAGACAGCAG GGATGCGATC TACATCCACC AGTCCGATCG GCTCCTCTTT GTAAACCGGC AGGCCTCCGT TCTTACCGGG TACTCCCATG AAGAACTCTT AACCATCCGG CTCTGGGACC TCGTGCACCC CGATGACCGG GAGATCCTTA TCCGGAATAA CCGGGACCGG TTGGCCGGCA ATCCGCCACC CCATGAGTTT ACCGCCCGGC TCCTGACCAA AGACGGCACG TCGCGGACCT GTGAATTTGT TGTGGACATG GTCATGTACC AGGGCTCGCC TGCAATCATG GGGATTGCAC GCGATATAAC TGAACGCAGG AAGACTGAAG AGGCGCTCGC TTCGGCAAAC ATGAAACTCA AACTTCTTTC GGGGATTACC CGTCATGATA TCAGGAACCA GCTCACTATC CTTGAAGGCC GCCTGGCATT CATGAAAAAG AAGGAGCCCG ACTCTCCCTT CCTTGAACAT TTTGAGAAGA TGTCTGCTGC TGCCCGGCGT ATTGCCTCGA TCATCCAGTT CACCAAGGAA TACGAGGATA TCGGCATCCG TGCCCCGGCC TGGCAGGACT GCCGCACCCT TGTCGATACT GCCGCACAAC AGGTCCATTC AGGGCAGGTC CCGGTAAAAA ACGATCTCCC CCCCGGGACG GAGGTGTTTG CCGACCCGCT CATTGTCAGG GTGTTTTACA ACTTGATGGA TAATGCAGCC CGGTACGGGG GAAAGATTAC CTTTATCCGG TTCTCTCTTG AGGGATCCGG TAACGATTAC CGGATCGTGT GCGAAGACGA TGGCGAAGGA ATACCGGCAG AAGATAAAGA AAAAATCTTC CTGCAGGGTT TTGGCAAAAA TACCGGCCTT GGCCTGTTTT TGTCTGCCGC CATTCTCCAT ATTACCGGGA TTACGATCCG CGAGACCGGC GAGCCGGGGA AAGGGGCACG TTTTGAGATC ATCGTGCCAA AAGGGGCATA CCGGTTCAGC GGCGGGGAGT AG
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Protein sequence | MYTVLYVDDE PDLLEISKLF LEQSGQFSVD ILPSAPEALA AMKVKTYDAI VSDYQMPGMD GIDFLKNVRA LGDTIPFILF TGRGREEVVI QALNEGADFY LQKGGDPTAQ FAELTHKVLL AIEHRSNAEK IQSLNRLYLV ISAIDRAIVQ LRTKSEFLSE VCRILVETGG FRMAWIGIPD PGEGIIRPVA SAGQVEGYLE IVRVALDDST RGCGPTGKAY REGKNCICND IVSDPCMEPW RKEALKRGYN TCAAFPFGRG SNNPGVLVLY ASELGFFNDQ IISLTNDLVA DIAFALATLD HQKERESAIA ALRESEEKYR LVVEDSRDAI YIHQSDRLLF VNRQASVLTG YSHEELLTIR LWDLVHPDDR EILIRNNRDR LAGNPPPHEF TARLLTKDGT SRTCEFVVDM VMYQGSPAIM GIARDITERR KTEEALASAN MKLKLLSGIT RHDIRNQLTI LEGRLAFMKK KEPDSPFLEH FEKMSAAARR IASIIQFTKE YEDIGIRAPA WQDCRTLVDT AAQQVHSGQV PVKNDLPPGT EVFADPLIVR VFYNLMDNAA RYGGKITFIR FSLEGSGNDY RIVCEDDGEG IPAEDKEKIF LQGFGKNTGL GLFLSAAILH ITGITIRETG EPGKGARFEI IVPKGAYRFS GGE
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