Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0327 |
Symbol | |
ID | 5410482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 314795 |
End bp | 317821 |
Gene Length | 3027 bp |
Protein Length | 1008 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640867543 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001403492 |
Protein GI | 154149874 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACAA AACCAAAACC AAAATCCGGC CCGGTAAAAA AGAATGTACC GGAGAGAAAA TCCTCTCCTG ATAATGGGGC AGTCCCGGAA AAGGGTGAGG CACTGTTCCC TATTGTCGGG ATCGGCGCTT CGGCGGGCGG GCTCGAAGCC TTTGAACTCT TTTTCAAGAC CATGCCGGCC GACAGCGGCA TGGCGTTTGT GCTCATCCCC CACCTCGATC CCGGGCATGC GAGCATGCTT TCCGAGATCC TCCAGCGCAA CACCACGATG CCGGTCCATG AAGCAGAAGA CCAGACGAGT ATCCGGCCGG ACCACGTGTA CATCATCCCG CCCAATAAGG ACATGGCGAT CTTCCACGGG GTGCTCCAGC TCAGCACTCC CGAACAGGTC CGGGGGATGC GGCTCCCGAT CGATTCGTTT TTCCGGTCGC TTGCCGAGGA CCAGGGCGAG CGGGCGATCT GCGTGATTCT TTCCGGCAGC GGGTCTGACG GCACCCTTGG CCTGCGTGCA GTCCACGGGG CGGGCGGGGT CTCGTTTGTG CAGGATCCTT CCACGGCAAA GTACGACGGC ATGCCCACAA GCGCGTCCCA GAGCGGTCTT GCCACCTACA TCCTGCCGGT GGAAAAGATA ACCGGACAAC TGGTCAGTTA TGTAAAGAAC CTTGCCCAGA CCGGCGTCCA CCCGGTTCCT ATGGCGTCAA AAGCGGTGAA TGCCACACGA AGGATCCTGA TGCTCATGCG GTCAAAGACC GGGAACGATT TCTCCCAGTA CAAGCAGAGC ACGATCCAGC GCAGGATCGA ACGGCGGATG GTGGTACATA ATCTCAGCGA CATGGACACG TATGCACGCT ACCTCCAGGA AAATCCTGCC GAGGTCGCCA TCCTCTTTAA GGAGCTGCTC ATCAACGTGA CCAGCTTTTT CAGGGACAAG GAAGCGTTCG AAGCGCTGGA AACAGAAGCC CTGCCCCTGC TTTTTGAGGA AAAACCGGAG AACTATATCT TCCGGATCTG GGTGCCGGGG TGCGCTTCGG GCGAAGAAGC TTATTCGCTT GCCATGCTTT TTAAGGAGAA GATAGATGAA TTCCGGCAGG ATTTCAGGGT CCAGATCTAT GCAACCGATA TCGATGACGA TGCGATCGCA ACAGCCCGGG CGGGGATGTA CCCGTCCAAC ATCTCCCTTG ATGTCTCCCC CGAACGGCTC CGGCGGTTTT TCACTAAAGA GGAGACCGGG TTCCGGATCA AAAAAGAGAT CCGGGAGATG GTGGTCTTTG CCGTCCAGAA CGTAATAAAA GACCCGCCGT TTACCAAGAT GAACCTTATT TCCTGCCGGA ACCTGCTGAT TTATTTTGAA AGCGAGCTCC AGGCCCGGGT GATCCCGGCC TTCCATTACG CGCTCAGCAC CGGGGGGATA CTCTTTTTGA GCCCCTCGGA AGGGATCGGG AATTTTACCG ATCTCTTTAG TCCCGTCAAC AAGAAGTGGA AGATCTACCG GGCCAAACCC TCGGGTCTGT CCGCCCGGGC GCTTGTGGCC CAGCGCTTTG CATGGACCAC CGAACCGTCA AAAAAGGAAC CGGGCGAGGT TTTCCTCCCC TCCGACAAGA CAAATTTTGC CGAACTCACC CGGCGCGTGC TCCTTGCGTC CTTTGCCCCG CCGTCGGTCA TAACCGATGA GAACGGGAGC ATCATCTATG TGCACGGGGA CACCGGCAAG TATCTCCAGC CGGCACCGGG ACAGATCAGC ACCAGTGTCA TCGACATGGC CCGCGAGGGA CTGCAGTTGG ATGTGAGGAG TGCGATCCAG AAAGCATCTG CAAAGAAGAC TACGGTTGTC GTAAAAGGCC TGCGAGTCAG GACGAACGAC GGTATCAGGG GAGTGGACCT CACGGTACGC CCGCTTACCG ACCTTGAGCC GGCACGGGAA CTGCTGCTCA TCAGTTTTGA AGAGACAAAG CAGCCTCCCG CAAAAAAACG CCGGTCGGGC AAATCCTCCG GGACCGGGGA GCAGGGATCG CAGCGCATCG AGCAGCTGGA GCAGGACCTT GCCTATACAA AAGAAAACCT GCAGGCCACT ATCGAGGAGA TGCAGGCAGC AAACGAGGAA CTCAAGTCCT CAAACGAGGA ACTCCAGTCT ACAAACGAAG AACTCCAGTC CACAAACGAG GAGCTGGAAA CCTCAAAGGA AGAACTCCAG TCGGTTAACG AAGAGATCGT GACGGTTAAC GCAGAGCTGC AGGCAAAGAT CGAGCAGCTC ACGGCAGTCC AGAACGATAT GAAAAACCTT CTCGAAAACG TCAACATCGG TACTATCTTC CTTGACACAA GCCTTGCCAT CAGGAGGTTC ACCCGCGAGG CAAAGCGGGT ATTCCGGCTT GCTGCCGCCG ATACGGGAAG GCCGCTTGCG GATATCCGGT CGAACATCCC GGATACGGAC CTTATTGCCG ATGCACAAGG AGTACTTGAC TCGCTCATAC CCCGGGAAAA ACCGGTTCGC ACGGCAGGTG GCGAGTGGTT CCTTGTCCGC ATTATGCCGT ACCGCACGCT GGAGAACGTA ATCGACGGCG TAGTAATGAC GTTTTCCGAT ATCTCCGCGT TAAAAGCAGT GGAAGCCGAG GCCCGGGCAG CCTGCGACTA TGCACAGAAC ATTGTCGATA CGATCCGGGA GCCGCTCGTG GTCCTGGATT CTGCCTTTGA AGTGGTTTCG GCAAGCGGGG CATTTTACCG GACCTTTGGC GTGACACCGG AAAAGACCCT GGGGAAATCC CTTTTTGCGC TTGGCAACCG GCAATGGGAT ATACCGGAAC TCCACGAGCT GCTGGAGACA GTCCTGCCAA AGAGTACGAC CTTTGAAAAT TTCGAAGTCC GGCATGATTT CCCCGGTATC GGGCAGCGGG TCATGGTCTT AAATGGCCGA AAGGTTATTG ACGACACGGG GAGTATTCAC CATATCCTGC TTGTAATGGA AGATATTACT CCCCAAAGAA GGGGAGCGGA TAAAAAACCT GTCCGGGGGA GCCGGGGAAG GGCCTGA
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Protein sequence | MMTKPKPKSG PVKKNVPERK SSPDNGAVPE KGEALFPIVG IGASAGGLEA FELFFKTMPA DSGMAFVLIP HLDPGHASML SEILQRNTTM PVHEAEDQTS IRPDHVYIIP PNKDMAIFHG VLQLSTPEQV RGMRLPIDSF FRSLAEDQGE RAICVILSGS GSDGTLGLRA VHGAGGVSFV QDPSTAKYDG MPTSASQSGL ATYILPVEKI TGQLVSYVKN LAQTGVHPVP MASKAVNATR RILMLMRSKT GNDFSQYKQS TIQRRIERRM VVHNLSDMDT YARYLQENPA EVAILFKELL INVTSFFRDK EAFEALETEA LPLLFEEKPE NYIFRIWVPG CASGEEAYSL AMLFKEKIDE FRQDFRVQIY ATDIDDDAIA TARAGMYPSN ISLDVSPERL RRFFTKEETG FRIKKEIREM VVFAVQNVIK DPPFTKMNLI SCRNLLIYFE SELQARVIPA FHYALSTGGI LFLSPSEGIG NFTDLFSPVN KKWKIYRAKP SGLSARALVA QRFAWTTEPS KKEPGEVFLP SDKTNFAELT RRVLLASFAP PSVITDENGS IIYVHGDTGK YLQPAPGQIS TSVIDMAREG LQLDVRSAIQ KASAKKTTVV VKGLRVRTND GIRGVDLTVR PLTDLEPARE LLLISFEETK QPPAKKRRSG KSSGTGEQGS QRIEQLEQDL AYTKENLQAT IEEMQAANEE LKSSNEELQS TNEELQSTNE ELETSKEELQ SVNEEIVTVN AELQAKIEQL TAVQNDMKNL LENVNIGTIF LDTSLAIRRF TREAKRVFRL AAADTGRPLA DIRSNIPDTD LIADAQGVLD SLIPREKPVR TAGGEWFLVR IMPYRTLENV IDGVVMTFSD ISALKAVEAE ARAACDYAQN IVDTIREPLV VLDSAFEVVS ASGAFYRTFG VTPEKTLGKS LFALGNRQWD IPELHELLET VLPKSTTFEN FEVRHDFPGI GQRVMVLNGR KVIDDTGSIH HILLVMEDIT PQRRGADKKP VRGSRGRA
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