Gene Mboo_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0296 
Symbol 
ID5411653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp284989 
End bp285843 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content57% 
IMG OID640867512 
Productmethyltransferase type 11 
Protein accessionYP_001403461 
Protein GI154149843 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCAAA AAACCAACCT GAACTACTGG ATTGATTACT GGAACCGGAC CAATCCCGCA 
TCCGATCTCA TGGACGAAGA GAGCCTTGTC TCCTTCTGGG ACAAGCGCTC CGAGGATTTC
GCAGACAAGA TCGCAACAGC CGGGGGCCGG AAGCGTTCAC GGGAGAACAT TGCGCTGCTT
GAGGCCTCCG GGTTTTGCGC AGAGGGCGCA CGGGTTCTCG ATATCGGTTG CGGGGCCGGG
TCTCTTTCCC TGCCCCTTGC CCGTGCGGGA GCAGAGGTCA CCTCGTTTGA CATATCCCCG
GGCATGCTTG CCCAGGTACA ACGCGTTGCG GACCGCGAGG GACTTTCGGT CACCACCATT
GCTGGTTCGT GGTGGACCGC GAATATCGAC CGTCTGGGAT TCCGTGAAAA GTTCGATCTC
GTGATAAGTT CCATGACCCC GGCAATAAAG GATGCAGAGA CGCTTGAGCG GATGATCACC
TGTTCGCGGG CTTCCTGCTT CTACATCGGC TCGTTTCCCG GCGGCAGGGA TGCGATTCTA
TCAGATCTGC TTTCACGGAT CGGGAAAATT CCCTCACCCC GCCGTCCTCC CATGGGCTTC
CTCTTCCCGT TCATGTACCT GTACCTCAAA GGCTATCGCC CGGAGGTTAC TTTTTCCCGC
CGCAGGTGGA ACGAAACGCT TGACACAAAA AAGGCTGCCG CCCATGCGAT CGATATCATC
AGCCACGATC AGACCGTTAC CCCGGCAATG AATCGGGCGA TCCAGCGGTA CTACAAAGAG
ACGGCAGTTG ACGGGAAATG CATCTTTAAA AACGAGATGT TCCTGGGCAT GATGGTCTGG
AAGGTCCGGC CATAA
 
Protein sequence
MPQKTNLNYW IDYWNRTNPA SDLMDEESLV SFWDKRSEDF ADKIATAGGR KRSRENIALL 
EASGFCAEGA RVLDIGCGAG SLSLPLARAG AEVTSFDISP GMLAQVQRVA DREGLSVTTI
AGSWWTANID RLGFREKFDL VISSMTPAIK DAETLERMIT CSRASCFYIG SFPGGRDAIL
SDLLSRIGKI PSPRRPPMGF LFPFMYLYLK GYRPEVTFSR RRWNETLDTK KAAAHAIDII
SHDQTVTPAM NRAIQRYYKE TAVDGKCIFK NEMFLGMMVW KVRP