| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0284 |
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| Symbol | |
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| ID | 5410306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 268075 |
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| End bp | 270723 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640867500 |
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| Product | LVIVD repeat-containing protein |
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| Protein accession | YP_001403449 |
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| Protein GI | 154149831 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5276] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.635237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC CCACACTCCT GCCAGCACGT ACCGTATTCA CCCTTCTTCT CCTGTCCCTC
CTGATCGGGA TCGGTGCTGC CGCGTCAGCT CCCTCGGTTA CCGACATTAC CCCGGATACA
AGAGAAAATA CGACCCGTAC TTTTACCGCA AACATCTCCG GTTCGGGTTT TGCGGCCGGG
GCGCAGGTAC TTCTGGTGCC AGTGGGCGCC CGCCCCATCC ATGCAGGCAG CATCACCGAC
GGGGGAGGCA CGGCCCCGTT CCTGAACGGC CCCCTGGCGG TTTTTCTTTC TGGCTCCCAT
GCATACGTGG CCAGCCAGGG GAGTAATGCG CTCGAAATTA TCGATGTCGC GGATCCGGCC
CATCCGGTCC ACAAAGGCAG CCTCCTCAAC GGGACCGGGG GTGCTCTCCT GAAGGCTCCC
ACCGGTGTAG CCGTATCAGG GAACTATGCG TATGTAACAA GTTCCGGGAA CAACGCCCTG
GAAATCGTCG ATATCTCAAA CCCGGCACAC CCGGTTCATG CAGGGAGCAT CACCAACGGA
ACCGGCGGGG CGCTCCTTTA CAACCCCCAG TCAGTCGCTG TTTCCGGCAG GTATGCATAT
GTGGCAGGCT CCGGGAGTAA TTCCCTGGAG ATCGTGGAAA TATCCGATCC TGCCGCCCCG
GTTCATGCAG GCACCATGAA AGATGATATC CTCTTCAAAA ATCCGACCGG CGTATTTGTC
TCAGGTAATT ATGCATATGT AACCAGTTCC GGAAACAACA CCCTTGAGAT CATAGATGTC
TCAAACCCGG CCAATCCCGT TCACAAGGGC ACCATCAATG ATGGAAAGGG AAAATCTCCA
TTCCTGAAAA ACCCCAAAAA TGTGTTCGTC ATCAGGAATT TCGCCTACGT TGCAAGCTTC
GGGGACAACA CCCTTGAGAT CGTGGATGTC GCAAACCCCG CAAACCCGAT CCATAAGGGA
GCCCTGGTAA GTGGTACGGG TGAGGCCATG CTGGGTGCTC CCACGGGCGT GTATGTGTCC
GACCATTACG CGTATGTGGC AAGTTACGGG AGCAACGCGC TTGAAATTGT AGATGTTTCG
AATCCCGCCG TCCCGATTCA TCTCGGTACT ATTTCGAACA TGCCCGGAGG TGCGCTGCTG
GATGTCCCCT CCGGTGTGTC CGTGTCCGGC CCGTACGCGT ATGTGACCGG TAAGACCGGC
AATTCGCTGG AGATCGTTGA TATCGGGAGT GTGATCTCGA TTCCGGCAGG CAGCGTTACG
TGGCGCTCTG CGACAATGAT TGCCAGCACA TTCAACCTGA CTGGTGCCGC AGCCGGGAAA
TATAATGTCG TTGTCGCTAA CCCCGGGAGT CCTCCGGGAA CACTGGCGGG AGGTTTTACC
GTCACTGCTC CGCAGCCGTG CCCTACGGTC ACCGGCATCA CCCCCTCCAG CGGTACCAAT
GCGACCCTTA TCCAGATTAC GGATCTCACG GGGAGCAACT TCAACACAAC CATTGCCCCT
ACAGTGAAAC TGAATCGTAC CGGATTTACC GACATCCTGG CCACCAATGT AACGGCCCTC
CGGTCAACGC AACTTACCTG TACGTTCGAT CTGACCGGCC GGGAAGCCGG CAGCTGGAAC
GTTGTGGTGA CTAACCCCGA CGAGCGGGGA GGTCTTCTCC AGAACGGATT CTCGGTAATA
TACCAGGTAC CAACAACCCC CCCAACCACA GTACCGACAA CTCTTCCAAC GGAAGTACCT
ACAACTTTCC CGACCGATGT GCCAACCCTC ACCCGGACTA CGGTTCCGAC AAACACTCAA
CCGGTTCCTC CACCGGAACC AACACCCCTG CCAGCGATAA CAGGTTCTGG GGGCAGCGTG
TCGGAGAGCG GAATATCCGG TCGGGGCATA TCATCTGTAG CCACATCTCC CGGCGCACCC
GCGGGAGGGA TTATGTCATT TGCCCTCGAT AATGCGGGAA GCAGGGGATT TGCGGAGTAC
CCCTATACTG TCACTGCGGC TACCCTCGTC CCGTCCCAGC CTCTTGGCCC TACCGATCTC
ATCGTCGCAT ATGGCATGAC AGTACGGCCC CCGGGTAACG ATCACGTCAC CGCGGGAATC
GTTTCCCTTG AGCCGGTTGC CACAAATCCA TCTGCCATCA GCTCCGGGAC TATCACCTTT
GCCGTGGCAG ATACCTGGCT CCGGGCAAAC CGTCTCACAC CGGCCCATGT CACTCTCATG
CGCCTGGAGG AGGACATCTG GTCTGAACTG CCAACCACAT ACCTGAACCG TTCCGGGGAT
GCCCATTACT TTACGGCAAC CACCCCGGGC TTCTCGTATC TTGCTGTTTC CACGCGGAGC
TCCATGGGAG GGGTGAATTC CATAGGGACC ATGGATACAG CCGCACTTTC CCCTGCCGTA
AGTATGCCTG TGGTGTCTGT GGCCCCCGCC CCGCCAGTCG CTCCGGATAC CCCTGCATCC
GTAGACAGAA CTCCTGAGGT ACCCCGGACC CCCCCTGTTC CGGCAAATAA CGGCGTCCCG
CAGGCATCCG GTACCGGGAC GGCTGCCGCA GTTATCGGCA CTGCTGGTGC CGCACCTGCG
TGCGGGCTGT ATCTCCGGCG CTGGTGGATC CGGCGGCAGA ACCCGAAACT GTTCCGGAAG
TACGATTGA
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| Protein sequence | MNKPTLLPAR TVFTLLLLSL LIGIGAAASA PSVTDITPDT RENTTRTFTA NISGSGFAAG
AQVLLVPVGA RPIHAGSITD GGGTAPFLNG PLAVFLSGSH AYVASQGSNA LEIIDVADPA
HPVHKGSLLN GTGGALLKAP TGVAVSGNYA YVTSSGNNAL EIVDISNPAH PVHAGSITNG
TGGALLYNPQ SVAVSGRYAY VAGSGSNSLE IVEISDPAAP VHAGTMKDDI LFKNPTGVFV
SGNYAYVTSS GNNTLEIIDV SNPANPVHKG TINDGKGKSP FLKNPKNVFV IRNFAYVASF
GDNTLEIVDV ANPANPIHKG ALVSGTGEAM LGAPTGVYVS DHYAYVASYG SNALEIVDVS
NPAVPIHLGT ISNMPGGALL DVPSGVSVSG PYAYVTGKTG NSLEIVDIGS VISIPAGSVT
WRSATMIAST FNLTGAAAGK YNVVVANPGS PPGTLAGGFT VTAPQPCPTV TGITPSSGTN
ATLIQITDLT GSNFNTTIAP TVKLNRTGFT DILATNVTAL RSTQLTCTFD LTGREAGSWN
VVVTNPDERG GLLQNGFSVI YQVPTTPPTT VPTTLPTEVP TTFPTDVPTL TRTTVPTNTQ
PVPPPEPTPL PAITGSGGSV SESGISGRGI SSVATSPGAP AGGIMSFALD NAGSRGFAEY
PYTVTAATLV PSQPLGPTDL IVAYGMTVRP PGNDHVTAGI VSLEPVATNP SAISSGTITF
AVADTWLRAN RLTPAHVTLM RLEEDIWSEL PTTYLNRSGD AHYFTATTPG FSYLAVSTRS
SMGGVNSIGT MDTAALSPAV SMPVVSVAPA PPVAPDTPAS VDRTPEVPRT PPVPANNGVP
QASGTGTAAA VIGTAGAAPA CGLYLRRWWI RRQNPKLFRK YD
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