Gene Mboo_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0193 
Symbol 
ID5411518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp183594 
End bp185648 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content63% 
IMG OID640867408 
Producthypothetical protein 
Protein accessionYP_001403359 
Protein GI154149741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTC CCGGCACCGG TGAGTTTGGC GAGACCGCGG TGCCGGTTTT GGCCGGGCCG 
GAGGCAGCGC TGTACAATGA CCTCTGCACA TGGCGGGAGC AGCTTGCCCG GAGCATTGCC
CGTACTCATA TCGGGATGCG GAGCAGCAGG ATTGGGCAGG CTGCAAATCA GGTGCTCTTC
TCGCTTCTTG CCCTTGCCAT TGCGGAGGAC CGGCACCTTG TCGATCCCGG GACAGTATGG
ACAATCGCGG AGACTGGTGA CGGGGAATCA TGTTTACCGG AGATTCTTTC AACCTTCGGA
GATCTGTGGG CCGGCACAGA TGGCACTGCG GGGACCGGCC GGAATCCGGA AGGAATTCCC
GTAATTGATG ATGCCCTGAT CAGGGAGATC GCTGGCCGGC TTACGGGTGC GGACCGGCCC
TACGATCTTT CGCAGATCCC GCTTGCATCC GTTGCCGCGA TCCTCGACCG GTACCTCACC
CGTACGGTCC GGCGATCTGC CGCCCACCAG GCAATTGTGA TCGACCGGCC GGAGACCGGG
GCATGGCAGG TGGAGATCAC CCCGGCGCTT GCGGACTATG CGGCCGGGCG TACGCTTGCC
GCAGTCTGTG CCGGCCGGTC CCCTGACGAT CCTCTCCCGC TCCGGGTAAT TGATCCTGCC
TGCGGGGCCG GTCGGATGCT CCTTGCTGCG TACCGGTACC TTCGTTCTCT CCCTGGCAAT
GATGAGCCGT CCGATCTTTT GCGGCACACG CTCCACGGCA TCGATCCTGA CCCTCATGCG
GTTGCGGCGG CAAGGATGAT GCTCGCCCTT GCGGCCTGTA GTGACAGAGA CGGATCCGCG
AATTCTCCAG AGTTTATCCC GGCATTCCGG GAATATCTGG CGATCCTGTC GGCCACGATC
CAGTGCGGGA ACGCACTTGT CGGTCCGACG ATCGCAGATG ATGAGTCATG GGCATTCTGT
CCGGTCCGGG AGCGCCATGA GCTCCGGCCC TTCGCGTGGC AGGAGTATTT TCCGGAAGTA
CTGCTACCCG GCGGATTCGA TGCGGTGCTC TGCTGCCCGC CCGAATACCC GGTGCCGGCC
CGGGAATGGC TACGGCAGTA CTTCCAGCGC CACTATACCG TTTACGATCC CGGTGCCGGG
CTCTCCGCGT ACGTGGTTGA AAAAAGCCTT GCCATACTGC GGCCGTATGG TGTTGCCGGT
ATTGTTGGCA GCGACCGCTG GCTCCGCGCC CGGTCCGGTG CCCCGCTGCG CACGTTTCTC
CTTGGGCGGC AACCGGAGGA GATCTTGACG GCCGGGAAAG ACTCCTGTTT TCTTCTCATG
GCAAATGCCC GTACCTTCCG GCCCTTCATT GTCCGGAATG CGGGACCGGC CCCGGCCGGT
GCAGATGCAA TCCGGGAGAT CCCGGGCTTC CCGGTCGATC CGCGGGATCT TGCGGCCGGG
GGCTGGGTGT TCCGCGATAC CCGCGGGAAA CGGCTGGTGG AAAAGATCTC CCGTGATACG
ACACCGCTTG GGGAGTACGT GCTCGGGGAG ATCCGGTATG GTGCCGGTAC CCGGCCGGTG
CCCTCATCAC ATGGCGGTCG GGACCGGATT ATCTTCTCCG CCTCTGCGGT TCCTCCGCGC
TTTGAGCTTG CCGGGAACCG TGCCGCCCCC GGCCCGGGGA CCGGGATCAT CATGTCCGGG
AGCCGGTACC TGCTCGGGCT GCTCAATAGC CGGCTTGCAG AATTCCTGTT CCACAGCATT
TGGGAAGAGA CAGGAGATCC GGGTGACGTT GTTGCCCTTT TTCCGGTTGC GACCCCGGAT
TTCGATGACC CGGTCCAGGC GGCCCGGCAC GGGCGGTTGG AATCGCTCGT GACAGAGAGG
CTCGCTCTTG CCCGGCACCG TACGCTTGCC CGGTCGCCCC GGGAACTCCA GGCCATCAAT
GCAGAGATGG TATCAACCGA AAAACAGATC GAGTCGCTGG TGTACGGGAT TTACGGCCTT
TCCATGGACG AGATCTCCTT TGTGGAATCA TCATTACCGT CGGAGAAACC CTTGTCTTCC
GGAAAACGGT CATAG
 
Protein sequence
MRPPGTGEFG ETAVPVLAGP EAALYNDLCT WREQLARSIA RTHIGMRSSR IGQAANQVLF 
SLLALAIAED RHLVDPGTVW TIAETGDGES CLPEILSTFG DLWAGTDGTA GTGRNPEGIP
VIDDALIREI AGRLTGADRP YDLSQIPLAS VAAILDRYLT RTVRRSAAHQ AIVIDRPETG
AWQVEITPAL ADYAAGRTLA AVCAGRSPDD PLPLRVIDPA CGAGRMLLAA YRYLRSLPGN
DEPSDLLRHT LHGIDPDPHA VAAARMMLAL AACSDRDGSA NSPEFIPAFR EYLAILSATI
QCGNALVGPT IADDESWAFC PVRERHELRP FAWQEYFPEV LLPGGFDAVL CCPPEYPVPA
REWLRQYFQR HYTVYDPGAG LSAYVVEKSL AILRPYGVAG IVGSDRWLRA RSGAPLRTFL
LGRQPEEILT AGKDSCFLLM ANARTFRPFI VRNAGPAPAG ADAIREIPGF PVDPRDLAAG
GWVFRDTRGK RLVEKISRDT TPLGEYVLGE IRYGAGTRPV PSSHGGRDRI IFSASAVPPR
FELAGNRAAP GPGTGIIMSG SRYLLGLLNS RLAEFLFHSI WEETGDPGDV VALFPVATPD
FDDPVQAARH GRLESLVTER LALARHRTLA RSPRELQAIN AEMVSTEKQI ESLVYGIYGL
SMDEISFVES SLPSEKPLSS GKRS