Gene Mboo_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0173 
Symbol 
ID5411711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp170680 
End bp170937 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content59% 
IMG OID640867388 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit 
Protein accessionYP_001403339 
Protein GI154149721 
COG category[C] Energy production and conversion 
COG ID[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGT ACCGGAATGA ACATGTTGCC ATCAGCAGGC CGGTGGCCGG GTCTGCCGGC 
CATACCGGGG CATGGCGGGT CTTCAAGCCG GTTGTCAATA GGGAGAACTG CAACGGATGC
GGGATCTGTG CGCTCTATTG CCCGGATGCC GTTATCGGGG AGGATCTCGT CATCGATCTT
GCGTTCTGCA AGGGCTGCGG GATCTGTGCA AACGAGTGCC CAAAAAAAGC GATCGCGATG
GTCCGGGAAG AGAAGTAA
 
Protein sequence
MSPYRNEHVA ISRPVAGSAG HTGAWRVFKP VVNRENCNGC GICALYCPDA VIGEDLVIDL 
AFCKGCGICA NECPKKAIAM VREEK