| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0127 |
|---|
| Symbol | |
|---|
| ID | 5410546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 119909 |
|---|
| End bp | 123154 |
|---|
| Gene Length | 3246 bp |
|---|
| Protein Length | 1081 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640867343 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_001403294 |
|---|
| Protein GI | 154149676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTT ATCGTTTCAT GATCCTGATT ATCGGACTGT TCCTGCTTGC AGGGGCGGGC
AGTGCCGCAG CGATACCGGA TCAAAATTCA ACAATTACCA GCAGTACCAG TTGGGTGGTG
GTGAATCACC AGGCAACCAT CACCATTACG GCACTCAATA CAACATCATC CATTCCGGTC
CCGGGCGCCT CCGTAACGGC GACGCTTAAC TCGACAACTC TGGGATCGCT GACGGTAAGC
AGCGGGACAA CGGATACCAC CGGCCAGGTA AACTTTCCTT TTTTGGCAGG AACAAAAACC
GGAGCAGTCA ATATCACGGC CACGATAACC TACAATGATA ATGGAAACCT CGTTTCGGTG
ACCAAAGTCT ATACCCAGAA TATCGATCAC GATGTTGCAC AGAATGCAGT GTTCGATTTC
CAGAATGAAG TGACCGTGGG AACAGAAACA CCCTTCAACA TCAGCTTTAC CGACCAGTAC
GGTAACCCGA TTGATAACAG GAATCCCTAT AATCCCCCCA TCATATCATT GTGGATATCG
GCATCCTCGG ACAACATGGC GGCTTTCAAT ATCAGCGGAA GCCATGTCCA GTATACATCG
CAGGAGCTTG ATGCCAACGG GAATATTTCT GTCAGCGTTG TGACTGACAC TGCCCCGGGA
GAAAACGAGA TCCTGCTCTC TCACTTCGGC AATGTCGGTA TCCCATGGGG GTTACCGCAG
TTTATCTATG GCATAAATAA CGGTGTACCC TATTCGATAG ATGAATCTGT TTTACCGTCC
TCTCTGACCC AGCCGGCAGA TAATGGAGTG GACCACGTTT TTACCATCAA CAATACGGTA
TACGATAAGT ACGGTAACCC TACGGAAAAT CAAGGGATCC TGGTGCAATC GAACTGGGCA
GGAGATCCTT CCGCAACTAT GCTGTCAAAC CCCTATGGTC AGATCATGTA TACGTATGGT
CCTCACAGCG CATCCGGCTA CGTTGTCTTA ACAGCTACCT CAGTAGCGAA TTCATCGGTC
AGTATCTCCA AGACCGTCCA ATTCTATAAC ACCGCACCGG TAAACATGCT CTTCTCGGCA
ACACCTCAGG TCATGCCAAG TCTTGATGCA AAATCCGGGC AGACTGCACA GCTTGTCGCA
AAAGTGGTAG ATACCATGGG TAACCCGGTG GCTAACCAGA CGGTTACATT CAGTCTGGGA
ACGCCCACAT ACACCTACGC GAACAGTTCG CTTGCCGGAC CACAGCTCCT CAATACGACA
GCGGTCACCA ATATAAACGG AACGGCCACA GTCCTTTTTG TTCCCGGAAG ATTTGATACG
AACAAGGAGA ACGTCAGTTA TGATGCAACA GATTCCGGAT ACGTTACGGC AACGGCAACC
TGGAGTTCGA TCAGCCAACC GCTCCAGCTG AGCTGGAAGA ACTATCCCTA CCTGAGCGAA
CTGACCACAA TATCATCCCA GAATGTTAAC GTCAACGGAA AATTCTATGT TACGGTCAGC
CTCACCGCTG ACGGATGGAA CCTGACCGGA ACACCGGCAG ATGTCGTGAT AGTATCTGAT
CTCGCGGCAG GTATCGGAGG AGCGACCAGG CTGACCCACA CAAAAGCTGC AGAGGTCGGC
TTTATTAAAA ATGCCACTGA CAACACCTAT GTCGCCCTTG CTTCCTTTGG AAGCGCTCCC
AATGCAGGAT CTACACCCTA TGACTCCTCA GATACCCAGA ACCTCTGGAA CCTCCAGCTC
TCCAAATCCA ATACTACGTA TACATACAGA CCCTTCAACC CCTATGGCAA TGTCTGGGAT
TACAATCTGG TCAATCCCGC TAACTGGAAC AGTATCTCAA GTTCGACTGC ATATTGTTTT
AATTCAAGTT CGCAGAAAAA TCCGTCCAGT CAAAGCTTGG GTCTGAGGGC CTGTGTGAAT
GCCACAAGCC CCTATGGGTA CACCTACCTC AACCCCTGGT CTGATTCAAA AATAGATGCT
GATCTGATGA ACGCCGGACC CACCTATAAG ACCACCAACC AGAACGCTCT TGTCAATACA
GTCAATGCAT ATACAGCGTA CGGAGGGACG GATTATGCAG CAGGAATTAA TGCTGCCCTC
CAGGAGCTCC AGAGCAAAGG CAATCCCTCC CATAACCAGA CCATCATTAT TATGGGAGAT
GGTGTCAACA TGATGGCCCC GATCGCACCG GGATCCTTTG AATCATACTG GCCATCGGAC
TGGAACCCCC GGAACGGGAC CGGTATCTCT GAAGGCCCCA ACCTTTGGTA TTTGGACGAA
AGCGACGTTG GAAAAGCAGC AGCATTGAAT GCATCAACGA CGGCAAAAAA CCTGGGTATC
ACCATCTATG GGATCCAGTT CCCGACACCA GACAATTACG GCCATAACAT CAACGATACT
GCATTCTTCC AGCAAATGGT GTCATCACCG ACAAGCACAT GGTACTATGC GCCGGATCCG
ACAACGATGA CCGGGATATT CCAGCAGATT GAGGGGCAAA TTCAGAATAC CGCAGGAGTA
AATACAACGA TGGCATTTAA CCTGCAGAGT GTTGCCGTCA ATTACAACAA CGTTTCCACT
ACTTATCCGG GAAATGAGGT ATTCTCATAC GTATATGATG CAAATGATAC TCCTTCGTCA
ACCCAAGTCA TCGATCAAAA TGGAATTACC ACGGTGATCA ACCAGACGGA TCAGTGGAAC
AATAACCAGA CCCTGATATT CAATATAGGC AAGATGACCG TAGGGCAAAC CTGGAGTACG
ACATTTGAGT TGCAACTGCT GAAACCGGGT ACAGTAAATG TTCCAGGAAA CCTTTCAACA
ATATGTTTTA ATACCGGAGA ATGCATGTCG CCAAATCAGG GGACTATTAA CGGAGTATAT
AACTATTCCA ATACCGGTTT TTCCATGCCA ACGATCAGCA TCACTGATCT CCAGGCATTC
GAAGAGAGTC AGTCTACAAA TATTGTACCC TTACAATGGA ATATCAGTTA CCCGGGCAGC
CAGTATGCCA CGGAAACCCT GTATTATAAC TCCCAGGCCG ATCCGACATG GAGATATATC
TACCAGCAGC CGGTCAATCC GGGGAACTGG ACACAAGCCT ATGACTGGAA CGTAGGAGGT
CTCCCGGCGG GAACCTATTC CGTTGAATTG ATCGCATATG CCCATGATGC AAACAGCGGC
AAAGAGATCA TCCCAACCGG AATTCAACTC GGGCTCTCCC CGAAAGCGTT TATCAGACTC
CAGTAA
|
|---|
| Protein sequence | MQIYRFMILI IGLFLLAGAG SAAAIPDQNS TITSSTSWVV VNHQATITIT ALNTTSSIPV
PGASVTATLN STTLGSLTVS SGTTDTTGQV NFPFLAGTKT GAVNITATIT YNDNGNLVSV
TKVYTQNIDH DVAQNAVFDF QNEVTVGTET PFNISFTDQY GNPIDNRNPY NPPIISLWIS
ASSDNMAAFN ISGSHVQYTS QELDANGNIS VSVVTDTAPG ENEILLSHFG NVGIPWGLPQ
FIYGINNGVP YSIDESVLPS SLTQPADNGV DHVFTINNTV YDKYGNPTEN QGILVQSNWA
GDPSATMLSN PYGQIMYTYG PHSASGYVVL TATSVANSSV SISKTVQFYN TAPVNMLFSA
TPQVMPSLDA KSGQTAQLVA KVVDTMGNPV ANQTVTFSLG TPTYTYANSS LAGPQLLNTT
AVTNINGTAT VLFVPGRFDT NKENVSYDAT DSGYVTATAT WSSISQPLQL SWKNYPYLSE
LTTISSQNVN VNGKFYVTVS LTADGWNLTG TPADVVIVSD LAAGIGGATR LTHTKAAEVG
FIKNATDNTY VALASFGSAP NAGSTPYDSS DTQNLWNLQL SKSNTTYTYR PFNPYGNVWD
YNLVNPANWN SISSSTAYCF NSSSQKNPSS QSLGLRACVN ATSPYGYTYL NPWSDSKIDA
DLMNAGPTYK TTNQNALVNT VNAYTAYGGT DYAAGINAAL QELQSKGNPS HNQTIIIMGD
GVNMMAPIAP GSFESYWPSD WNPRNGTGIS EGPNLWYLDE SDVGKAAALN ASTTAKNLGI
TIYGIQFPTP DNYGHNINDT AFFQQMVSSP TSTWYYAPDP TTMTGIFQQI EGQIQNTAGV
NTTMAFNLQS VAVNYNNVST TYPGNEVFSY VYDANDTPSS TQVIDQNGIT TVINQTDQWN
NNQTLIFNIG KMTVGQTWST TFELQLLKPG TVNVPGNLST ICFNTGECMS PNQGTINGVY
NYSNTGFSMP TISITDLQAF EESQSTNIVP LQWNISYPGS QYATETLYYN SQADPTWRYI
YQQPVNPGNW TQAYDWNVGG LPAGTYSVEL IAYAHDANSG KEIIPTGIQL GLSPKAFIRL
Q
|
|---|
| |