| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0123 |
|---|
| Symbol | |
|---|
| ID | 5410063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 112398 |
|---|
| End bp | 113576 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640867338 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403290 |
|---|
| Protein GI | 154149672 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1679] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.476328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGCCG GTATGCACCT TGACCAGGAG GACGAGCAGA TCCTTGCCGG CGAGCAGGGG
GAGACCCGGC AGAAAATGCT CGAGCTGCTT GTTGCACTCG GGAAGGTATT CGGGGCCGAA
CGGCTCGTCC CCATCAAAAG TGCACAGGTG AGCGGGGCAT CTTACAAGAC GATCGGGAAG
TATGGCCTGG AATGGCTCTC AAGCCTTGAT GCAAAGGCGG TAGTCCCGGC TGTACTCAAC
CCGATCGGAA TGCCCCGGGG GCGGTGGGAA GAGATGGGGA TCGACCCGGA CTTTGCAGAA
AAGCAGCAGG CTGTTGTCGC CGCGTACGAG CGCCTCGGTA TCCGGCTTGA CTGCACCTGT
ACTCCTTACT ACCTGTACGA GACCCGGTAC GGCGATCACC TGGCCTGGTC GGAGTCATCT
GCTGTCAGCT ATGCAAACTC TGTGCTCGGG GCCCGGACCA ACCGGGAGGG AGGCCCGAGT
GCCCTTGCTG CAGCGCTCGT GGGAAAGACT CCCTGCTATG GCCTGCATCT GGACAAAAAC
CGCGTGCCGC AGATGGTGAT CGATGTCCAT GCCGATACTG CCGGCTGGGG GATTGCCGAG
TACGGCGCCC TCGGGTTTCA TGCAGGTAAA CTCGCGGGTA ACCGGATCCC GTACTTCCGC
GGGATCCGGC CTGAACCCGA CCAGCTCAAG GCTATCGGTG CTGCAATGGC GGCAACCGGC
GCCGTCGCGC TCTACCATGT TGAGGGAGTA ACCCCCGAGG CGCAGAAGAT CGGGTACGAT
CTTTCCGGTC TTGATACCGT TCCTGTTGAA CAGGCCGAGA TCGCCTCCGT GTTCTCGGAG
ATCCCGGTGG ATGCGGTTGC AGTCGGCTGC CCCCACTGCT CCCCGGCGGA ACTTGCCGAG
ATCGCCCGGC TTCTCACCGG CAAAGTGGTG ACAAAACCCC TCTATGTCTT TGCGGCACAA
GGTGTGATCG AGCAAAACGC GAGGGTGGTT GATTCGATCG AGAAGAGTGG GGCCCGGGTC
TTTGCCGACA CCTGCATGGT GGTCTCGCCG GCCATGGAAC AGTACCGTTC GATCATGGTA
AACTCCGGAA AAGCCCTTGC CTACGTGCCC AACATGTGCG GGGGGCAGGC CCGGATCGGG
ACGATTGCAG ACTGTATCCG GGTTGCAACG GAATGGTGA
|
|---|
| Protein sequence | MVAGMHLDQE DEQILAGEQG ETRQKMLELL VALGKVFGAE RLVPIKSAQV SGASYKTIGK
YGLEWLSSLD AKAVVPAVLN PIGMPRGRWE EMGIDPDFAE KQQAVVAAYE RLGIRLDCTC
TPYYLYETRY GDHLAWSESS AVSYANSVLG ARTNREGGPS ALAAALVGKT PCYGLHLDKN
RVPQMVIDVH ADTAGWGIAE YGALGFHAGK LAGNRIPYFR GIRPEPDQLK AIGAAMAATG
AVALYHVEGV TPEAQKIGYD LSGLDTVPVE QAEIASVFSE IPVDAVAVGC PHCSPAELAE
IARLLTGKVV TKPLYVFAAQ GVIEQNARVV DSIEKSGARV FADTCMVVSP AMEQYRSIMV
NSGKALAYVP NMCGGQARIG TIADCIRVAT EW
|
|---|
| |