Gene Mboo_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0087 
Symbol 
ID5411059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp79894 
End bp81291 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content58% 
IMG OID640867301 
Productaspartate kinase 
Protein accessionYP_001403254 
Protein GI154149636 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0531987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC TCATGAAATT CGGCGGAACA TCCGTCGCCG ATGCACAGTG TATCGGGCGG 
GTCGTGGATA TCCTTGAGCA CCACCGCAGG GCAGGGGATG AGATCGCGGT CGTGGTATCA
GCACAGCGGG GTGTGACCGA CCAGCTCATC GATATTGCAG AAAAGCTCCC GAACGCAAAG
GACTGCACTG CCGTCCTCCC GCTGATTGCC GCACTCCGTG AACGGCACGT AAAGACCCTT
GAAGGAGCGG CCCCGGATTT TTCGGCCGAG ACGGAAAAAG TGATTGAAAA GCGCCTTGCG
AGCCTCCAGC ACATCCTTGT CGCTGTCTAC AATCTGCGGG AGCTCACTCC CCGCTCCAAG
GACTACATCA TCTCGTTTGG GGAACGCCTG CTTGCCCCGA TTGTCAGTGC TGCCCTCCGC
CAGCGGGGGA TCCCGTCGAA CGTGTTTGAC GGCTGCGAGG CCGGCATCCT CACCACCCCC
CAGCACGGCG AGGCGACCGC GTTGTGCGAG AGTGATGAAA GGATCAAAAA GAAGATCGAC
CCGCTGCTCA AAAACGAGAT CCCGGTCATC ATGGGTTTCA TGGGCTGCAC CGAGAACGGG
ATCATCACGA CCCTTGGGCG GAGCGGATCG GATTACTCCG CGTCCATCGT GGGCGCCGGC
ATCGACGCTG ACGAGATCTG GATCTGGACC GATGTCGATG GCATTATGAC TTCCGATCCC
CGGGTGATCA ACGATGCCCG GGTCTTAAAG AGCGTGTCGT ACATCGAGGT TATGGAGCTC
TCCTATTTCG GCGCGAAGGT TATGCACCCC CGCTCCATTG ATCCTGCGAT GAGGAAGAAC
ATCCTTGTGC GGGTCAAAAA TACGTTCAAC CCGACCCACC CGGGTACCAT GATCGTGAGA
AACGGTCACC GGGACAGCCG GGTGGTAAAA GCCCTCACTT ACATTGACAA GGTCGCCTCA
ATCAACATCA ACGGCGCCCA GATGATCGGG AGGCCCGGGG TGGCAAAGAT GATCTTCTCG
GCCCTTGCCG ACAAGGAAGT CAACGTGATG ATGATTACTC AGGGGTCAAG CGAAGCAAAT
ATTTCGCTCA TCGTGGACGA ATCGCACCTT CCGATTGCGG TGGCTGCATT AGAGTTCCTG
GTAAAAGACG GCATTGTGCG GGAAGTAACG CACAACAAGG ACGTCTGTGC GGTTGCCGTT
GTCGGTGCCG GCATGGCCGG TGCCGCAGGA TCGGGCGGGC GGATCTTTAC CGCCCTTGGC
CGGGCCGGGA TCAACGTGAT GATGATCTCC CAGGGCTCAA GCGAGGCCAA CATCTCGTTT
GTTGTGAAGC AGGCAGACGG CCCGCGTGCG GTCCGGGTGC TGCACGATGA ATTCCGGCTC
TCGGAGGAAT GTGCATGA
 
Protein sequence
MKYLMKFGGT SVADAQCIGR VVDILEHHRR AGDEIAVVVS AQRGVTDQLI DIAEKLPNAK 
DCTAVLPLIA ALRERHVKTL EGAAPDFSAE TEKVIEKRLA SLQHILVAVY NLRELTPRSK
DYIISFGERL LAPIVSAALR QRGIPSNVFD GCEAGILTTP QHGEATALCE SDERIKKKID
PLLKNEIPVI MGFMGCTENG IITTLGRSGS DYSASIVGAG IDADEIWIWT DVDGIMTSDP
RVINDARVLK SVSYIEVMEL SYFGAKVMHP RSIDPAMRKN ILVRVKNTFN PTHPGTMIVR
NGHRDSRVVK ALTYIDKVAS ININGAQMIG RPGVAKMIFS ALADKEVNVM MITQGSSEAN
ISLIVDESHL PIAVAALEFL VKDGIVREVT HNKDVCAVAV VGAGMAGAAG SGGRIFTALG
RAGINVMMIS QGSSEANISF VVKQADGPRA VRVLHDEFRL SEECA