| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0007 |
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| Symbol | |
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| ID | 5412090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 5180 |
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| End bp | 6124 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640867221 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_001403174 |
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| Protein GI | 154149556 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACCGA CAGATCTGAT CCTTGCCGGC GCAACCCTTG TCCTTGCGCT TGCGATCGAC
CGGGCAATCG GCGATCCGCA TTCCCCGTAC CACCCGGTGG CCCTGCTTGG GCGATTTATC
AGCTTGTGGG GACGGCCTTC GCGGTACCCT CCTGTTTTTC AGCGGGCTGC CGGCATCTTT
TTCTGGCTGG TAACAGTCTG TTTCTTTGCC CTTCCGTTTT TCCTCTTTGG CCGATATGTC
CCGTGGCTCG TGTACCTTAT CGACGCTCCT TTTCTCCTCA AATGCTGTTT TGCATGGCGC
TCGCTGGAGG AGCATGCACA AGAGGTCGTC GCAGCGTTGA AGAACGGCAT TGATGCCGGC
CGGGAACAGG TAGGCCTGAT GGTCTCGCGT GACACGGCCT GTCTGGATCC AGAGCATATC
CGCTCGGCTG CATATGAGTC TGTTGCCGAG AACCTTACCG ACAGCATCAT CTCACCGCTC
TTCTATTTCT CCCTTCTCTC GCCGTTTGGT TTCGGGCTTG CCGGCGCAGC AGGTTTCCGG
GCGGCAAATA CGATGGATGC GATGCTCGGG TACCGGGATG AGCGGGCCCG GATCGGCTGG
TGCCCGGCAA GAATGGACGA TATTCTCAAC TATCTCCCGG CCCGGATCAC AACACTGTAC
CTGCTTGCCT GGTTTGCGAC CCAGGGAACG TTCGGGGCTG CGTGGCGTAC AATGCGCAGG
GACGGTAAGA AACGCCCGGG GTTCAATGGT GGGATCGTGA TGGCTGCGAT GGCGGGAGGG
TGCGGTATCC GTTTTGAGAA GCCGGGAGTC TACTCCCTGG GCGATGGCGG GAGGTCGCTT
GAAGAGGGGG GACCGGCAAT CATCCGGGCG GTCAGGGTGG TGACGCTTGC GTTTGCGGCA
ACTGCTGCCA GCACACTTAT TTTATTGGCA TGGCTGATCC AATAG
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| Protein sequence | MVPTDLILAG ATLVLALAID RAIGDPHSPY HPVALLGRFI SLWGRPSRYP PVFQRAAGIF
FWLVTVCFFA LPFFLFGRYV PWLVYLIDAP FLLKCCFAWR SLEEHAQEVV AALKNGIDAG
REQVGLMVSR DTACLDPEHI RSAAYESVAE NLTDSIISPL FYFSLLSPFG FGLAGAAGFR
AANTMDAMLG YRDERARIGW CPARMDDILN YLPARITTLY LLAWFATQGT FGAAWRTMRR
DGKKRPGFNG GIVMAAMAGG CGIRFEKPGV YSLGDGGRSL EEGGPAIIRA VRVVTLAFAA
TAASTLILLA WLIQ
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