Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3716 |
Symbol | |
ID | 3625006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4791968 |
End bp | 4792660 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702549 |
Product | metal-dependent hydrolase |
Protein accession | YP_307159 |
Protein GI | 73671144 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGGCG TAAAGATTAC CTGGCTCGGG CATTCGGCTT TTTTGTTAGA AGCTGAAAAG AAATTGTTGA TCGACCCTTT TATTTCAGGG AACCCACTGG CTCCGTGCAG CCCTGAAGAA CTGAACCCTG ATATAATAAC CGTGACTCAC GGGCACCGCG ATCACCTTGG AGATACGATC GAAATCGGAA AACGAACCAG ATGCCGGATA ATTACCATTC ATGAGGTTGC AAACTATATA AAATCGAAAG GAGTTTTTGC AGAAGGCATG GGCAAGGGCG GTACAGTAAA TGTAGAAGGC ATAAAGCTAA CCATGACCGA TGCGCTCCAT TCCTCCTCAA TTGATGCCTC GGGTTTTAGT TTCGATGGTG GCTCCCCGGC AGGTTTCATT ATACAAATCA ACGGACATTC CATCTACCAC GCCGGAGACA CTGGGGTTTT CGGGGATATG AAACTCATAG GTGAACTCTA TGAACCTGAA CTGGTCCTTC TGCCCATAGG CGACAAATTT ACAATGGGCA TAAAAGAAGC CACAAAAGCC GTAGAACTCA TCCTGCCCAG AACCGTAATC CCTATGCACT ATAGCACCTT TGACGTAATA AAACAGGACC CTGAAGAGTT CAAAAGAGCA GTTGAGGCAA AAGTCGATAC GAAAGTCATT ATCATGAAAC CCGGAGAATC TATAGATCTT TGA
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Protein sequence | MVGVKITWLG HSAFLLEAEK KLLIDPFISG NPLAPCSPEE LNPDIITVTH GHRDHLGDTI EIGKRTRCRI ITIHEVANYI KSKGVFAEGM GKGGTVNVEG IKLTMTDALH SSSIDASGFS FDGGSPAGFI IQINGHSIYH AGDTGVFGDM KLIGELYEPE LVLLPIGDKF TMGIKEATKA VELILPRTVI PMHYSTFDVI KQDPEEFKRA VEAKVDTKVI IMKPGESIDL
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