Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3583 |
Symbol | |
ID | 3625807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4598566 |
End bp | 4600158 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637702414 |
Product | hypothetical protein |
Protein accession | YP_307031 |
Protein GI | 73671016 |
COG category | [R] General function prediction only |
COG ID | [COG3894] Uncharacterized metal-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.395243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0427775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCAGG CAATAAATAT CGATATCGGT ACCAGTGGAA TTAGAGCTCA GCTACTGAAT CTTATGGACT CCTCTGTCCT CAGGACTGCA ATTTTATCCA GAAACCCACT TCCGGGCGCA AATGTTGTTG ACCATATGGA CTTTGCGATT AATTATGGGC AGGGTATAGC CCATGAAATT CTTATCTCAG CCGTCAATTC CCTGATAAAG AACCTTAAGC CAGAAAATCT CAAGCGTGTA GCTGTTTGTG GGAATCCTAT CCAATTGTCG CTATTCGAAG GAATAGAAAT ACGAGACCTT GCATTTGCGG GAAAAAATGC CCTCGAGAAA ATAAATGTAA AACTTCCAGA AAGGAACGGG CACATGGTCT CAGGAAACGA AATAGGACTT TGTGCAGATG TTGATGTGGT TATCCCACCT TCAGTAAAGC ATGAAATCGG AGCCGATGCC CTTGCCATGA TGGTAAAGAG TGGGTTTCTA GATACTCCCG AGGCATGTAT GGTTACGGAT TATGGGACAA ATGCCGAGAT GGCCCTGAAG GTAGGAAACA GAATATACAC AGGATCGGCT GCTGCAGGCC CTGTTATCGA AGGACAGCAG ATCAGCAAAG GAATGCTGGC AACGCCTGGA GCAATTGCCG ACCTGAAGCT TTCCGGAGGC TGGCAATCGC TTGTTCTTGA CGAAAAACTC AGGCTGGTAG AAGGACCAAG AATAGACCTG CGCAACAGAA CTTTTAAAAC CATCGGATAT CCTGCAAAGG GAATTACAGG CACGGGGGTA ATTGCCCTTA TGTATGCAGG ACTTGTAACT GGCATAATAA AGCCTCCTCA TATTGAAGGC GATATAATTC GGCTTGGAAA GGAAATTACG TTTACGGAGA AAGATGTAGT AGAAGCCGGA AAAGCCTTCG GAGCCCTGAG AGCAGGCCAC CTGACCCTGA TGCATGAGGC AGGGATAGCA TACGAAGATC TGGAAACAAT GTATATGTGC GGGGCAAGCG GAACGTATGT AGATCCTATA AAAGCCCGCT TTACAGGCAT TGTGCCCGCA ACCCCGAAAC GGATTGTCCA GTGCGGAAAC ACTTCCCTGG AACTTGCAAA AGACCTTGCC CTTAATCCCG ACTATCTCTC ATATCTCAAT GAAATGAAAG AATCGGTCCT TTCAAATCAT ATAATGTTTG CCTCGTCCCC AACCTTTGCA TCCATTTACG TCCAGGAAAT AGCTCTTTGG AATGAAGGAA TGCCACTTGA AAAGTATAAC GCAAATCTTG AAAGATCCGG TATCCAGCCT ATCCCACAAA AATTTCAGGA AAGCCTTATT GAAAGAAAAT CGAATGAAGA TATCCACGAA CTTGGAAAAT GCCTGAAGAT CATGGAGTCT AAACTGGACT TTATCGCTAC CATCAAGTGC AGTGGTTGTG ATACCTGTTT GAAAGAATGT CCGGGAGAAG CTCTTTCAAG AGAATGCGAA AGTTTCAGGA TCAATACTGC AAGATGTCTT GGTACTACCT GCAGAAGATG CGAAGAAAAG TGTCCTGAAA AGCGGTTCTC TATTAGTAAC TTTAAGCTGG AACACCCAGA GTTCATAAGA TAA
|
Protein sequence | MDQAINIDIG TSGIRAQLLN LMDSSVLRTA ILSRNPLPGA NVVDHMDFAI NYGQGIAHEI LISAVNSLIK NLKPENLKRV AVCGNPIQLS LFEGIEIRDL AFAGKNALEK INVKLPERNG HMVSGNEIGL CADVDVVIPP SVKHEIGADA LAMMVKSGFL DTPEACMVTD YGTNAEMALK VGNRIYTGSA AAGPVIEGQQ ISKGMLATPG AIADLKLSGG WQSLVLDEKL RLVEGPRIDL RNRTFKTIGY PAKGITGTGV IALMYAGLVT GIIKPPHIEG DIIRLGKEIT FTEKDVVEAG KAFGALRAGH LTLMHEAGIA YEDLETMYMC GASGTYVDPI KARFTGIVPA TPKRIVQCGN TSLELAKDLA LNPDYLSYLN EMKESVLSNH IMFASSPTFA SIYVQEIALW NEGMPLEKYN ANLERSGIQP IPQKFQESLI ERKSNEDIHE LGKCLKIMES KLDFIATIKC SGCDTCLKEC PGEALSRECE SFRINTARCL GTTCRRCEEK CPEKRFSISN FKLEHPEFIR
|
| |