Gene Mbar_A3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3583 
Symbol 
ID3625807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4598566 
End bp4600158 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content45% 
IMG OID637702414 
Producthypothetical protein 
Protein accessionYP_307031 
Protein GI73671016 
COG category[R] General function prediction only 
COG ID[COG3894] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.395243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0427775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGG CAATAAATAT CGATATCGGT ACCAGTGGAA TTAGAGCTCA GCTACTGAAT 
CTTATGGACT CCTCTGTCCT CAGGACTGCA ATTTTATCCA GAAACCCACT TCCGGGCGCA
AATGTTGTTG ACCATATGGA CTTTGCGATT AATTATGGGC AGGGTATAGC CCATGAAATT
CTTATCTCAG CCGTCAATTC CCTGATAAAG AACCTTAAGC CAGAAAATCT CAAGCGTGTA
GCTGTTTGTG GGAATCCTAT CCAATTGTCG CTATTCGAAG GAATAGAAAT ACGAGACCTT
GCATTTGCGG GAAAAAATGC CCTCGAGAAA ATAAATGTAA AACTTCCAGA AAGGAACGGG
CACATGGTCT CAGGAAACGA AATAGGACTT TGTGCAGATG TTGATGTGGT TATCCCACCT
TCAGTAAAGC ATGAAATCGG AGCCGATGCC CTTGCCATGA TGGTAAAGAG TGGGTTTCTA
GATACTCCCG AGGCATGTAT GGTTACGGAT TATGGGACAA ATGCCGAGAT GGCCCTGAAG
GTAGGAAACA GAATATACAC AGGATCGGCT GCTGCAGGCC CTGTTATCGA AGGACAGCAG
ATCAGCAAAG GAATGCTGGC AACGCCTGGA GCAATTGCCG ACCTGAAGCT TTCCGGAGGC
TGGCAATCGC TTGTTCTTGA CGAAAAACTC AGGCTGGTAG AAGGACCAAG AATAGACCTG
CGCAACAGAA CTTTTAAAAC CATCGGATAT CCTGCAAAGG GAATTACAGG CACGGGGGTA
ATTGCCCTTA TGTATGCAGG ACTTGTAACT GGCATAATAA AGCCTCCTCA TATTGAAGGC
GATATAATTC GGCTTGGAAA GGAAATTACG TTTACGGAGA AAGATGTAGT AGAAGCCGGA
AAAGCCTTCG GAGCCCTGAG AGCAGGCCAC CTGACCCTGA TGCATGAGGC AGGGATAGCA
TACGAAGATC TGGAAACAAT GTATATGTGC GGGGCAAGCG GAACGTATGT AGATCCTATA
AAAGCCCGCT TTACAGGCAT TGTGCCCGCA ACCCCGAAAC GGATTGTCCA GTGCGGAAAC
ACTTCCCTGG AACTTGCAAA AGACCTTGCC CTTAATCCCG ACTATCTCTC ATATCTCAAT
GAAATGAAAG AATCGGTCCT TTCAAATCAT ATAATGTTTG CCTCGTCCCC AACCTTTGCA
TCCATTTACG TCCAGGAAAT AGCTCTTTGG AATGAAGGAA TGCCACTTGA AAAGTATAAC
GCAAATCTTG AAAGATCCGG TATCCAGCCT ATCCCACAAA AATTTCAGGA AAGCCTTATT
GAAAGAAAAT CGAATGAAGA TATCCACGAA CTTGGAAAAT GCCTGAAGAT CATGGAGTCT
AAACTGGACT TTATCGCTAC CATCAAGTGC AGTGGTTGTG ATACCTGTTT GAAAGAATGT
CCGGGAGAAG CTCTTTCAAG AGAATGCGAA AGTTTCAGGA TCAATACTGC AAGATGTCTT
GGTACTACCT GCAGAAGATG CGAAGAAAAG TGTCCTGAAA AGCGGTTCTC TATTAGTAAC
TTTAAGCTGG AACACCCAGA GTTCATAAGA TAA
 
Protein sequence
MDQAINIDIG TSGIRAQLLN LMDSSVLRTA ILSRNPLPGA NVVDHMDFAI NYGQGIAHEI 
LISAVNSLIK NLKPENLKRV AVCGNPIQLS LFEGIEIRDL AFAGKNALEK INVKLPERNG
HMVSGNEIGL CADVDVVIPP SVKHEIGADA LAMMVKSGFL DTPEACMVTD YGTNAEMALK
VGNRIYTGSA AAGPVIEGQQ ISKGMLATPG AIADLKLSGG WQSLVLDEKL RLVEGPRIDL
RNRTFKTIGY PAKGITGTGV IALMYAGLVT GIIKPPHIEG DIIRLGKEIT FTEKDVVEAG
KAFGALRAGH LTLMHEAGIA YEDLETMYMC GASGTYVDPI KARFTGIVPA TPKRIVQCGN
TSLELAKDLA LNPDYLSYLN EMKESVLSNH IMFASSPTFA SIYVQEIALW NEGMPLEKYN
ANLERSGIQP IPQKFQESLI ERKSNEDIHE LGKCLKIMES KLDFIATIKC SGCDTCLKEC
PGEALSRECE SFRINTARCL GTTCRRCEEK CPEKRFSISN FKLEHPEFIR