Gene Mbar_A3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3463 
Symbol 
ID3626436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4442964 
End bp4444145 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content46% 
IMG OID637702292 
Productaminotransferase 
Protein accessionYP_306916 
Protein GI73670901 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0107968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGACCTT CATGTGATCC TTCTAAGTTT GTTGCCGACG TTGTGAAAGA AATTCCTCCT 
TCGGGAATAC GCCGTTTTTT TGATCTGGTT TCCGGACTTG AGGATGTAAT CTCCCTTGGT
GTAGGAGAGC CTGACTTTAT AACTCCATGG CATATCCGTG AGATGTGTAT TCATTCTCTG
GAAAAAGGGC AAACCTCATA TACATCAAAT TACGGGCTTC CTGAGCTCAG AGACGAACTT
ACCAGAACTT ATTACAGGCG CTATGGTCTG GATTATGATC CTTCATCCGA GATACTCATC
ACAACAGGGG TGAGTGAAGC TCTGGATATA GCAGTAAGGA CGGTGGTCAA CCCTGGTGAT
GAGGTTATTA TCGTCCAGCC TTCATATGTG GCATATTTAC CTTCTGTTGT TCTTGCAGGA
GGTAAGCCGG TTATCGTTTC CACCCACAGG GATGATGAGT TTAGCCTGAC TGCAGAAGCC
CTCAAACCTG CAATCACGGA CAAGACGAAA GCAATAATTC TCAACTTCCC TAACAATCCT
ACAGGAGCGA TCATGTCAAA GGAAGGCCTC GAGGATATTG CTGACCTGGT TGTGGAGAAT
GATCTATTTG TTATCTCGGA CGAAGTTTAC GAGTGCCTTA CCTATGAAGG CAAACACGTT
CCGTTATCTT CCCTTGATGG CATGAAAGAA CGGACTGTTA TGCTTAACGG GTTTTCCAAG
GCTTATGCAA TGACAGGGCT CAGGCTCGGT TTTGCAATGG GTTCTCCTGA GATTATACAT
TCAATGATGA TGATCCATCA ATATTCCATG CTCTGTGCTC CCATAACAGC TCAAATTGGA
GCAATTGAAG CACTCCGTCA CGGTAAAGAT GAAATGGAGC GGATGGTCCG GGAATATGAC
CGGCGCAGGC ACTTTATTGT CAGAGGCTTT AACAGGATAG GGCTTGAATG CTGCAACCCT
AAAGGAGCAT TTTACGCTTT CCCCTATGTA GGAAATACCG GACTCTCTTC CTCTGAGTTT
GCAGAACGCC TTCTGGATGA AAAGAAAGTC GTTGCAATCC CCGGAGATGC CTTTGGAGAG
GCAGGTGAGG GCTTCCTTCG CTGCGCCTAC GCAGCATCCA TAAATGATAT CAGAAAAGCG
TTAGACAGAA TGGAAGACTT TGTGGACAGG TTAAAGCAGT AA
 
Protein sequence
MRPSCDPSKF VADVVKEIPP SGIRRFFDLV SGLEDVISLG VGEPDFITPW HIREMCIHSL 
EKGQTSYTSN YGLPELRDEL TRTYYRRYGL DYDPSSEILI TTGVSEALDI AVRTVVNPGD
EVIIVQPSYV AYLPSVVLAG GKPVIVSTHR DDEFSLTAEA LKPAITDKTK AIILNFPNNP
TGAIMSKEGL EDIADLVVEN DLFVISDEVY ECLTYEGKHV PLSSLDGMKE RTVMLNGFSK
AYAMTGLRLG FAMGSPEIIH SMMMIHQYSM LCAPITAQIG AIEALRHGKD EMERMVREYD
RRRHFIVRGF NRIGLECCNP KGAFYAFPYV GNTGLSSSEF AERLLDEKKV VAIPGDAFGE
AGEGFLRCAY AASINDIRKA LDRMEDFVDR LKQ