| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3429 |
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| Symbol | |
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| ID | 3624716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4395450 |
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| End bp | 4396901 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637702257 |
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| Product | sodium transport protein |
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| Protein accession | YP_306882 |
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| Protein GI | 73670867 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000905163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.144349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAGGAA GGTGGTTTCT TATAGATAAC AGCGCAGTCT TTAATGCATT AGGAAAAATT
CTTTTCCTTC TGGCATTTAC AATGCTTGTT CCCCTTTTAG TAGCCTTTTA CTACCGGGAA
CCTCTTGTCC CCTTTATTGT TTCCTTTTTC ATAACACTTG TTTCTGGCTT GCTTCTCATG
CGATTCAAAG GTCGTGAGGA TTGGCAGCAA AAAGAGGCCC TTGCCATTGT GGCTTTGAGC
TGGCTTGCAG CAGCTATTTT CGGGGCTATT CCTTTTCTTT TTGAAGGAGT TTCTTTTATT
GATGCAGTTT TTGAATCAAT GTCGGGTTTT ACTTCAACGG GTTCTTCAAT TCTTACGAAT
ATAGAGAGCT ATTCAAGAGG ACTTCTTTTC TGGCGGTCTT TTACCGCCTG GCTTGGAGGC
ATGGGAATCA TTGTACTTTT CATAGCAGTT CTGCCAAAGC TCGGAGTTGC CGGCCGTCAG
CTGTTCAGGG CTGAGGCTCC AGGTCCTACT GAAGATAAAC TGAAGCCAAG AATCCGGGAA
ACTGCAAGGA TTCTATGGAC GCTCTACATT CTTATCTCTG CTCTTGAAGT TGTGGCTCTA
TTTCTGGGTG GAATGTCCCT TTACGATGCT CTCAATCATT CTTTTGCCTG TATGGCTTGT
GGGGGATTTT CTACTTATAA TGCAGGAATA GAAGCTTTTC ACAGTCCTAT TATTGAATTT
ATTCTCACAT TTTTCATGTT TATTGCTGGG GCTAACTTTG CTCTTTATTA CCGGGTGATT
CGTGTCAATA AGTTTGCTCT CTTTCGAGAC GAGGAATTCA AGGCCTATTC TTTTTTTATC
CTCGGTTTCA CGGGTTTACT TACACTGGTT CTATTCAAAG ATATGGGATT CTCTCCATTC
AATTCTTTTC GTTATGCCAT ATTTCAGATA ACCTCTGTTA TGACAGCCAC TGGCTTTGCT
TCAACGGATT TTAATATGTG GAAGGACTCA GCAAAAATTC TGGTTCTTTC AGTCATGTTT
ATCGGAGGCT GTGCGGGTTC TACAGGCGGT GGCATGAAGG TTGTACGTTT TCTGTTGATG
TTAAAATATG CAAGGAGAGA ACTCTTCAAA TTTGTTCATC CTCGACTCGT CAGGTCTATC
CGGTTAAATA ATAAAGCAGT ACCGGAAGAC ATTTTACAGT CAATTCTCTC TTTTGTTGTG
CTTTATATAG GAGTTTTTGT TGTAGGTACA GTGCTTCTAA CACTACTGGG AGTTGATATG
GTAAGCTCGG TTACAGCTTC GATAACGACT CTCGGAAATA TAGGTCCTGG TTTTAACATT
GTCGGGCCTA TGGCAAATTT TGAATCAATC CCACTGCTAG GCAAAATTAT TCTTATCAGT
AATATGTGGG TAGGCAGGCT AGAGGTTTAT ACCGTGCTTG TACTCTTTAC AAGGGAATTC
TGGCACTCAT AA
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| Protein sequence | MGGRWFLIDN SAVFNALGKI LFLLAFTMLV PLLVAFYYRE PLVPFIVSFF ITLVSGLLLM
RFKGREDWQQ KEALAIVALS WLAAAIFGAI PFLFEGVSFI DAVFESMSGF TSTGSSILTN
IESYSRGLLF WRSFTAWLGG MGIIVLFIAV LPKLGVAGRQ LFRAEAPGPT EDKLKPRIRE
TARILWTLYI LISALEVVAL FLGGMSLYDA LNHSFACMAC GGFSTYNAGI EAFHSPIIEF
ILTFFMFIAG ANFALYYRVI RVNKFALFRD EEFKAYSFFI LGFTGLLTLV LFKDMGFSPF
NSFRYAIFQI TSVMTATGFA STDFNMWKDS AKILVLSVMF IGGCAGSTGG GMKVVRFLLM
LKYARRELFK FVHPRLVRSI RLNNKAVPED ILQSILSFVV LYIGVFVVGT VLLTLLGVDM
VSSVTASITT LGNIGPGFNI VGPMANFESI PLLGKIILIS NMWVGRLEVY TVLVLFTREF
WHS
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