Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3422 |
Symbol | |
ID | 3624709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4385492 |
End bp | 4386715 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702250 |
Product | geranylgeranyl reductase |
Protein accession | YP_306875 |
Protein GI | 73670860 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.351163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGACA TGTATGATGT TTTAGTGATA GGTGCGGGTC CTGCAGGTTC TATTGCCGCC AGAACCGCAG CCGAAAAAGG GCTGGATGTA CTTTTAATCG AGAAACGCCA GGAGATAGGT GACCCTGTAC GCTGTGCTGA AGGCGTGAAC AAAGCATATC TCAAAAAATA CGTGGAAATT GACAAGAGAT GGATTTGTGC TGACCTTAGT GCTTCCCATA TTTACGCGCC GGACGGTACA AAGATAGAGA TGGCAGAAGA ACTCTCTGGT GGAGAAGTAG GTTACGTCCT TGAAAGAAAA GTATTTGACC GGGCTCTTGC AGAAAAGGCT GCCGAAGCCG GAGCGGAAGT TAGGGTGAAA ACCAGAGCCA CTGGCCTTAT CATTGAAGAC GACTTTGTCA AAGGAGCTAG GCTCATGCAT CTCGGAAAAG AGTATGATGT GCGGGCCAAG ATAGTAATAG GTGCTGACGG GGTCGAATCA AAGGTAGGCA GATGGGCAGG CATCGATACT TCCTTAAAGC CGATAGACAT AGAGACCTGC GCCCAATACC TGATAGCTGG AGCGAACATA GACCAGCACC ACTGCGAATT TTACATAGGT AATGAAATTG CACCTTGCGG CTATATATGG GTCTTTCCGA AAGGCGATGG AAAAGCCAAT GTAGGGATCG GAGTTCTCGG GAGCAAGACT GGAAAATTCA AACCAAGGCC TGTAGACTAT CTTAACAAGT TTCTGGAAAA TAAATTTCCC GATGCCAGGA TAGTCGAGAT GGTTTTCGGA GGAGTTCCGG TTTCGGGTAG CATTGAGAAA ACTTCCACTA ACGGGTTGAT GCTAATAGGA GACGCTGCCC GCCAATCCGA CCCTATCACA GGCGGAGGAA TTCTTAACGC AATGAATGCT GGAAAGATGG CAGGAGAAGC TGCATATGCA GCTATATCCG CAGGAGATGT CTCCCTCGAA AAACTCGAAG AAGTTTATGA GAAACCGTGG AGAGCAACCC TGGGGCACGA TATCGACATG AGCCTTATAG TAAAGAATTG CTTTATCAAT CTAAGCGATG AAGACCTGAA TTCGCTTGCT CATTCCCTAG AAAAGGTGAA ATTTGAAAGA ATGAGCCTTC TTGACCTGTT ACAGGCTCTC TTTAAAGCCG ATAAAAAACT TCTATGGGAC CTTCGAGTAC TTTTCAAAGA TGCCGCAAAA GAAGTGGTAA AGAATAAGAC ATAA
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Protein sequence | MKDMYDVLVI GAGPAGSIAA RTAAEKGLDV LLIEKRQEIG DPVRCAEGVN KAYLKKYVEI DKRWICADLS ASHIYAPDGT KIEMAEELSG GEVGYVLERK VFDRALAEKA AEAGAEVRVK TRATGLIIED DFVKGARLMH LGKEYDVRAK IVIGADGVES KVGRWAGIDT SLKPIDIETC AQYLIAGANI DQHHCEFYIG NEIAPCGYIW VFPKGDGKAN VGIGVLGSKT GKFKPRPVDY LNKFLENKFP DARIVEMVFG GVPVSGSIEK TSTNGLMLIG DAARQSDPIT GGGILNAMNA GKMAGEAAYA AISAGDVSLE KLEEVYEKPW RATLGHDIDM SLIVKNCFIN LSDEDLNSLA HSLEKVKFER MSLLDLLQAL FKADKKLLWD LRVLFKDAAK EVVKNKT
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