Gene Mbar_A3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3420 
Symbol 
ID3624707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4383300 
End bp4384820 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content43% 
IMG OID637702248 
ProductMoaA/NifB/PqqE family protein 
Protein accessionYP_306873 
Protein GI73670858 
COG category[R] General function prediction only 
COG ID[COG1964] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.549751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA TAAAGTCTGT TTGTCCAGAA TGCAAAAAAG TTCTTGATTC CACTATATTT 
GAAGAAAACG GCAAGATAAT GCTGAAAAAA ACTTGTCCAG AACACGGGAC CTTCACGGAT
GTTTACTGGT CGGACAGCAA GCTATACTAC AGGTTCAGGC GCTATTCTTA CGTCGGTAAT
GGAGTTTCAA ACAGTAATGA AACTCTTTCT TCCGATGGCT GTCCCTGGGA CTGCGGAATT
TGTTCCGGGC ACAAAACAGG GACTTTGCTT GCAAACATCG ACGTTACCAA TCGTTGTAAT
CTCAATTGTC CGGTGTGCTT TGCTAATGCC AAAGCAAGTG GATTTATATA TGAACCGGAC
TTTGAACAGA TAAAAGAAAT GATGCTTACT CTCCGAAATC AAGAACCTGT TCCCTGCTAT
GCCGTCCAAT TTGCCGGAGG AGAGCCTACA GTCCGGGAAG ACCTTCCGGA AATTATCGAA
ACAGCTCAAG AACTTGGGTT TTCACAGATC CAGATTGCAA CTAATGGTGT CAGACTCGCA
AAAAGCCAGG AATACTGTGA AGCTTTAAGG ACCGCAGGGC TTCATACTGT ATATCTATCC
TTTGACGGAG TCTCAAAGGA ACCATACATG GAGACCCGAG GATTTAATGC CCTTCCTGTA
AAACAAAAGG CTCTTGAAAA TTGCAGGCAG ACCGGCCTGA GTAGTGTTGT GCTCGTGCCC
ACCCTGATAA AAGGTGTTAA TGATCATCAG GTTGGAGATA TTGTCCGCTT TGCGGTTAAA
AATGAGGACG TGGTTAGAGG TGTAAACTTC CAGCCAGTAG CGTTTGCAGG CCGCATTGAT
CAGGCCATGC GAAAAGAACA GAGAATAACA ATTCCCGATC TAATATCACT TTTGGAAGAA
CAAACCGAAG GAGAGATTCC CAGCTCAGCC TGGTATCCTG CATCTGCTGC AGTTCCCATA
ATCCGATTCG TAAGTGCGGT ACGAAAAGTT CCGCTCCCCG AGTTTACAAT TCACCCGATC
TGTGGGGCTG CCACATATGT TTTTGAAGAG GAAGGAAAGG TAATTCCAAT AAATGAATTT
GTGGATGTTG ATGGGTTCCT TGAGTTCCTT GAGAACGTTA CTCCCGAATT TGAGGGGCAA
GGTTCTAACG TAACGAAACT TGCAAAAGTT CTTTATAATA TCCCGCGCTA CATTGATGAA
GCCAGAAGCC CAAAGGATCT TAAGATAATC TCCCTGATAA CTAATTTTCT TAAAAATGGT
ACAAGAGAGC ATGCTGCCCA ATTTCATCGA AAATCACTTT TCCTCGGAGC TATGCACTTT
CAGGACCTTT ACAACCTGGA TCTGGAAAGG GTTGAACGCT GCGGAATCCA CTATGCCACC
CCTGATGGCA GAATAATTCC CTTCTGCACT TATAATAATT TTCACAGAGA AGGAGTAGAA
GCAAAGTATT CAAAACAATA TAGGAAAAAT ATGGAGTTTG AGAAGAAAAC CCTGAACGTT
AAGGAAAGAG GAGCAGCTTG A
 
Protein sequence
MKHIKSVCPE CKKVLDSTIF EENGKIMLKK TCPEHGTFTD VYWSDSKLYY RFRRYSYVGN 
GVSNSNETLS SDGCPWDCGI CSGHKTGTLL ANIDVTNRCN LNCPVCFANA KASGFIYEPD
FEQIKEMMLT LRNQEPVPCY AVQFAGGEPT VREDLPEIIE TAQELGFSQI QIATNGVRLA
KSQEYCEALR TAGLHTVYLS FDGVSKEPYM ETRGFNALPV KQKALENCRQ TGLSSVVLVP
TLIKGVNDHQ VGDIVRFAVK NEDVVRGVNF QPVAFAGRID QAMRKEQRIT IPDLISLLEE
QTEGEIPSSA WYPASAAVPI IRFVSAVRKV PLPEFTIHPI CGAATYVFEE EGKVIPINEF
VDVDGFLEFL ENVTPEFEGQ GSNVTKLAKV LYNIPRYIDE ARSPKDLKII SLITNFLKNG
TREHAAQFHR KSLFLGAMHF QDLYNLDLER VERCGIHYAT PDGRIIPFCT YNNFHREGVE
AKYSKQYRKN MEFEKKTLNV KERGAA