Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3280 |
Symbol | |
ID | 3627890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4216793 |
End bp | 4217995 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637702116 |
Product | hypothetical protein |
Protein accession | YP_306741 |
Protein GI | 73670726 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.338919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTGACG AAGTGCTGCT CAAGTTTGGG CAGCACAAGT TAGCTCATTC TATTGTAGTA AAAGCAATGA TCCTCAACTG TCTTGGTTTC GTAGATAGTC GTCTTTACAT GCATTCTCAG TACTTTGAAA CCCTTCCTGT TGAAAGGCTA CTTGGCTCCG GGATCAGTGC ATCTGACCTT ACTGATGATG TTTTAGGTCG AAATCTTGAT GAAATATATG AAGCAGATTC TACTCAGCTT TTCATAAAAC TTGCCTTGAA AATGATGAGA ATAGTGAACA TCAGGACTCA ACTTCTTCAA TGTGACACCA CCAATTTTAG CGTTTATGGA GATTACAAAC ATATTGATGG CAGTTCTGCC ATCGAAATAA CATATGGTCA TGCAAAAGAG GGTAAAGATG ACCTGCAACG TTTTGGACTT GGAATCATAA CAAACCAATA TGGAATCCCA TTATTTGCAA AAACTTACTC TGGTAATGCA TCAGACAAGG ATACCATAAT TGAGGCAATG AAAAAACTTC AAGAAAACAT AACTTTCCCT GATGATGTTT ATTACATAGC GGACAGTGCT CTATACTCTG ACAATAACAT CAAATCAATG AGAAAAGATA TGGAGTGGAT TACTCGTGTC CCTTCAACAC TAAACCTTTC AAAAGATTTG TTGATTTCTG ATCTTGAGTT TAAACCAGGA AATATCGTTC ACTATGTTAT AAATACAGAA GCAGTTAGGA ATGAAGAAGT TATATTGAAT GAAAAAGAGC ATCAGGGAAG GTTTGTAATT GCAAGCAATG ATCTCAATCT TGATGCTAAA AAGATGCTGG ATTACTACAA GAATCAAAGT AAGGTTGAAA AAGGATTCAG GTTCATAAAG GACAAAAGTT TCAGGGTTTC AGAGGTTTAC TTGAAAAAAC CTCAAAGAAT TGAAGCTCTA TCAGTGGTAA TGGTATTGAC TCTGATGGTT TACTCGGTAG CAGAATGGAA ATTAAGAGAA AGGCTAAAAG AAACAGGGGA AACAATACTT GACCAGGTTA AAAAACAAAC TCAAAAGCCC ACTTTGAAGT GGGTTTTTAT CCTAATGAGG GGGATTACAG AAGTAAAAAT AGAAATTGAT TCAAAAGTAG TAACTCAAAT TGCCAATATG AGTGAAGTTA AAGACAAAAT AATAAGGTTG ATGGGGAAAA ATTGTGAAAA ATACGACTTT TGA
|
Protein sequence | MIDEVLLKFG QHKLAHSIVV KAMILNCLGF VDSRLYMHSQ YFETLPVERL LGSGISASDL TDDVLGRNLD EIYEADSTQL FIKLALKMMR IVNIRTQLLQ CDTTNFSVYG DYKHIDGSSA IEITYGHAKE GKDDLQRFGL GIITNQYGIP LFAKTYSGNA SDKDTIIEAM KKLQENITFP DDVYYIADSA LYSDNNIKSM RKDMEWITRV PSTLNLSKDL LISDLEFKPG NIVHYVINTE AVRNEEVILN EKEHQGRFVI ASNDLNLDAK KMLDYYKNQS KVEKGFRFIK DKSFRVSEVY LKKPQRIEAL SVVMVLTLMV YSVAEWKLRE RLKETGETIL DQVKKQTQKP TLKWVFILMR GITEVKIEID SKVVTQIANM SEVKDKIIRL MGKNCEKYDF
|
| |