Gene Mbar_A3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3280 
Symbol 
ID3627890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4216793 
End bp4217995 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content36% 
IMG OID637702116 
Producthypothetical protein 
Protein accessionYP_306741 
Protein GI73670726 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.338919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGACG AAGTGCTGCT CAAGTTTGGG CAGCACAAGT TAGCTCATTC TATTGTAGTA 
AAAGCAATGA TCCTCAACTG TCTTGGTTTC GTAGATAGTC GTCTTTACAT GCATTCTCAG
TACTTTGAAA CCCTTCCTGT TGAAAGGCTA CTTGGCTCCG GGATCAGTGC ATCTGACCTT
ACTGATGATG TTTTAGGTCG AAATCTTGAT GAAATATATG AAGCAGATTC TACTCAGCTT
TTCATAAAAC TTGCCTTGAA AATGATGAGA ATAGTGAACA TCAGGACTCA ACTTCTTCAA
TGTGACACCA CCAATTTTAG CGTTTATGGA GATTACAAAC ATATTGATGG CAGTTCTGCC
ATCGAAATAA CATATGGTCA TGCAAAAGAG GGTAAAGATG ACCTGCAACG TTTTGGACTT
GGAATCATAA CAAACCAATA TGGAATCCCA TTATTTGCAA AAACTTACTC TGGTAATGCA
TCAGACAAGG ATACCATAAT TGAGGCAATG AAAAAACTTC AAGAAAACAT AACTTTCCCT
GATGATGTTT ATTACATAGC GGACAGTGCT CTATACTCTG ACAATAACAT CAAATCAATG
AGAAAAGATA TGGAGTGGAT TACTCGTGTC CCTTCAACAC TAAACCTTTC AAAAGATTTG
TTGATTTCTG ATCTTGAGTT TAAACCAGGA AATATCGTTC ACTATGTTAT AAATACAGAA
GCAGTTAGGA ATGAAGAAGT TATATTGAAT GAAAAAGAGC ATCAGGGAAG GTTTGTAATT
GCAAGCAATG ATCTCAATCT TGATGCTAAA AAGATGCTGG ATTACTACAA GAATCAAAGT
AAGGTTGAAA AAGGATTCAG GTTCATAAAG GACAAAAGTT TCAGGGTTTC AGAGGTTTAC
TTGAAAAAAC CTCAAAGAAT TGAAGCTCTA TCAGTGGTAA TGGTATTGAC TCTGATGGTT
TACTCGGTAG CAGAATGGAA ATTAAGAGAA AGGCTAAAAG AAACAGGGGA AACAATACTT
GACCAGGTTA AAAAACAAAC TCAAAAGCCC ACTTTGAAGT GGGTTTTTAT CCTAATGAGG
GGGATTACAG AAGTAAAAAT AGAAATTGAT TCAAAAGTAG TAACTCAAAT TGCCAATATG
AGTGAAGTTA AAGACAAAAT AATAAGGTTG ATGGGGAAAA ATTGTGAAAA ATACGACTTT
TGA
 
Protein sequence
MIDEVLLKFG QHKLAHSIVV KAMILNCLGF VDSRLYMHSQ YFETLPVERL LGSGISASDL 
TDDVLGRNLD EIYEADSTQL FIKLALKMMR IVNIRTQLLQ CDTTNFSVYG DYKHIDGSSA
IEITYGHAKE GKDDLQRFGL GIITNQYGIP LFAKTYSGNA SDKDTIIEAM KKLQENITFP
DDVYYIADSA LYSDNNIKSM RKDMEWITRV PSTLNLSKDL LISDLEFKPG NIVHYVINTE
AVRNEEVILN EKEHQGRFVI ASNDLNLDAK KMLDYYKNQS KVEKGFRFIK DKSFRVSEVY
LKKPQRIEAL SVVMVLTLMV YSVAEWKLRE RLKETGETIL DQVKKQTQKP TLKWVFILMR
GITEVKIEID SKVVTQIANM SEVKDKIIRL MGKNCEKYDF