Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3253 |
Symbol | |
ID | 3627730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4176780 |
End bp | 4177439 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637702089 |
Product | hypothetical protein |
Protein accession | YP_306714 |
Protein GI | 73670699 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.210788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGG ATCTGATAGA GAAAACGAGG GAATTTGTAA CTACTTTTCT TGAAGGCGAG CCCAGTTCCC ACGATATGTC TCATATAAAT CGAGTAGAAG CTCTCTGCCT GGAAATCCAG AAGGAAGAAG GTGGCGATCT TCTCGTACTT CAGCTTGCAG CTCTCCTCCA TGATGTCGGC GTAATTAAAG AACATGAAGA GGGCGGGGAC CATGCCGTAT ACAGTGCCGA CATTGCTTCT GAATTTCTTT CGAGAACAGG GCTCGGAAAA GAGGTTATTG AAGCTGTTAC TGGTTGTATC CGGACGCATC GCTTCAGTGC AGGGGAAAAG CCGGATAGTC TCGAAGCTCG AATTTTGCAG GACGCCGACA GGCTTGATGC CCTTGGAGCA GTGGGGATCT TCAGGGCTGT TCTTTCCATG GGAGCTCTCA GGATGTTAAA GCACACAACA GGGATGGATA AGGGGAGTTC AAAAAGAACC GTGTACATTG AAGACCCTAT TGAAGGCTTT AACGAATATA TGCAGTACAA ACCTTTCACA ATTCCTGAAA AGTTGAATAC CGACACTGCA AAAAAGATTG CCGATGAAAG GCTGAAAATC ATGCGTATTT ATCTTAAAGC CCTGAACCTG GAGGCCGGGA TTGACGAAAG AGGGCTCTGA
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Protein sequence | MNMDLIEKTR EFVTTFLEGE PSSHDMSHIN RVEALCLEIQ KEEGGDLLVL QLAALLHDVG VIKEHEEGGD HAVYSADIAS EFLSRTGLGK EVIEAVTGCI RTHRFSAGEK PDSLEARILQ DADRLDALGA VGIFRAVLSM GALRMLKHTT GMDKGSSKRT VYIEDPIEGF NEYMQYKPFT IPEKLNTDTA KKIADERLKI MRIYLKALNL EAGIDERGL
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