Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3200 |
Symbol | |
ID | 3627103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4115148 |
End bp | 4115609 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637702039 |
Product | hypothetical protein |
Protein accession | YP_306664 |
Protein GI | 73670649 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.370954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0153861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTAAAAC AATTCTCAAT TATTCTTATC ATTTATTTCC TTGGCGACCT GATGCAGAAA GCTTTAGGGT TGCCAATTCC GGGCAATGTC CTGGGAATGC TCATTCTTTT CTTTAGCCTG TATACAGGCG TAGTTAAACT CAATATGATA GATAAAATAA GTGATTTCTT ACTGGAAAAC ATGGCTTTCT TCTTTCTTCC AGCAGGGGCC AGCCTTATAA CCTGTTTTGC CTTGCTTGAA GGAAAATTGA CTGCTATTCT GACAGTTTCC CTTATTTCTA CCTTTGTAAT ACTGGCTGTA ACGGGGCTTA CTGTGGAGCT TGTTCAAAGG TTCTTCAGGA AAAAGCCGGT AAAAATAGCC AGTCGTATAG AAAATAAAGG CAATAAAGCT AATAATAACG GATCTGGAAG GAATACAAAA AGTGTGCATG CCCATGAGAA TAGAAGAGAA GAGGTGATCT GA
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Protein sequence | MLKQFSIILI IYFLGDLMQK ALGLPIPGNV LGMLILFFSL YTGVVKLNMI DKISDFLLEN MAFFFLPAGA SLITCFALLE GKLTAILTVS LISTFVILAV TGLTVELVQR FFRKKPVKIA SRIENKGNKA NNNGSGRNTK SVHAHENRRE EVI
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