Gene Mbar_A3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3200 
Symbol 
ID3627103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4115148 
End bp4115609 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content39% 
IMG OID637702039 
Producthypothetical protein 
Protein accessionYP_306664 
Protein GI73670649 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.370954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0153861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAAAAC AATTCTCAAT TATTCTTATC ATTTATTTCC TTGGCGACCT GATGCAGAAA 
GCTTTAGGGT TGCCAATTCC GGGCAATGTC CTGGGAATGC TCATTCTTTT CTTTAGCCTG
TATACAGGCG TAGTTAAACT CAATATGATA GATAAAATAA GTGATTTCTT ACTGGAAAAC
ATGGCTTTCT TCTTTCTTCC AGCAGGGGCC AGCCTTATAA CCTGTTTTGC CTTGCTTGAA
GGAAAATTGA CTGCTATTCT GACAGTTTCC CTTATTTCTA CCTTTGTAAT ACTGGCTGTA
ACGGGGCTTA CTGTGGAGCT TGTTCAAAGG TTCTTCAGGA AAAAGCCGGT AAAAATAGCC
AGTCGTATAG AAAATAAAGG CAATAAAGCT AATAATAACG GATCTGGAAG GAATACAAAA
AGTGTGCATG CCCATGAGAA TAGAAGAGAA GAGGTGATCT GA
 
Protein sequence
MLKQFSIILI IYFLGDLMQK ALGLPIPGNV LGMLILFFSL YTGVVKLNMI DKISDFLLEN 
MAFFFLPAGA SLITCFALLE GKLTAILTVS LISTFVILAV TGLTVELVQR FFRKKPVKIA
SRIENKGNKA NNNGSGRNTK SVHAHENRRE EVI