Gene Mbar_A3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3113 
Symbol 
ID3626563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4001968 
End bp4003011 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content42% 
IMG OID637701951 
Productpotassium channel protein 
Protein accessionYP_306580 
Protein GI73670565 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.144823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.715084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTT CCGGACGAAA GAATGGTAGT TTTATAACAG AATTTCGGAA GATACTGCAC 
AGGCATCCCT ATGTCGCGTA CAAAATAGTG GCTGTGTTCA TTTTTGTTAT TTATGTTCTG
ACTTTCGAGT ATTTTATGAT TTTTGAGAAC CAGCCCGAAA ATGCAAACCT TATTACTGCT
ATCTACTGGG CCACAACCAC CATTGCTACA GTCGGGTATG GCGACATTGT CTTCACTTCT
CTGCCAGGAA GACTTTTTTC TATAGTTGTG CAGGTTCTGG GCATAATCTT GATTTCGGGT
TTTCTTATAA CCTACGTTGT TGCTCCCTGG ATGGACAGAG TTATCAAGTT CAGGCTGCCG
AGAAAGATCT CTTCAGGCAT GAAAGATCAC ATAGTTATCT GCGGATACAA TCAATTGGTT
GAAACCCTGA TAGATGAGTT GACCGAGGAG GATATGTTCT TTGTAATAGT CGAAGAAGAA
GAAGAGATCA TCAGGGAACT TGTAGATAAA AATATTTCCT GCATTTTCGG GTCTCCGAGT
GATAAGCAAA CCCTTATGAA TGCTGGTATA GAGAAAGCCA AACTCCTTAT TGCAAATAAG
TCGGATGAAA GAAATGCGAA TATCGTTTTG ACTGCCAGGG AATTTCAGTA TGTCAACATT
ATTGCCATTG TAGAGGACCA ATCTAACTCA AGATACCTCA AATATGCAGG GGCCGATACG
GTCGTTTCTC CCAAATCGAT GTTTGGGGAG TTTATCGGCA GGAAGGCGAT GGACAGGCTT
GTAAGCAGGG TTACGGGGGC AACTGAAATT TTTGAGGGAG TTCATATTGT TGAGTTTCCT
GTTTACCTGA AAAGTCCTCT TATAGGTAGG TCACTTAAGG AAATCTCCAG CCAGCGACTC
ACAGGTGCAA AGATTGTAGG AATCTGGAAT AGTGGGACTC TATCTTTTGA TCCCAAGGAA
GATGATATTG TCCGGGAGAA TAACGTTTTG CTGGCTGTAG GTACCCGTGA GGAACTTTCA
AAACTGAAGA AACTGACACA TTGA
 
Protein sequence
MVTSGRKNGS FITEFRKILH RHPYVAYKIV AVFIFVIYVL TFEYFMIFEN QPENANLITA 
IYWATTTIAT VGYGDIVFTS LPGRLFSIVV QVLGIILISG FLITYVVAPW MDRVIKFRLP
RKISSGMKDH IVICGYNQLV ETLIDELTEE DMFFVIVEEE EEIIRELVDK NISCIFGSPS
DKQTLMNAGI EKAKLLIANK SDERNANIVL TAREFQYVNI IAIVEDQSNS RYLKYAGADT
VVSPKSMFGE FIGRKAMDRL VSRVTGATEI FEGVHIVEFP VYLKSPLIGR SLKEISSQRL
TGAKIVGIWN SGTLSFDPKE DDIVRENNVL LAVGTREELS KLKKLTH