Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3100 |
Symbol | |
ID | 3625308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3989233 |
End bp | 3990474 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701937 |
Product | hypothetical protein |
Protein accession | YP_306567 |
Protein GI | 73670552 |
COG category | [C] Energy production and conversion |
COG ID | [COG0711] F0F1-type ATP synthase, subunit b |
TIGRFAM ID | [TIGR01144] ATP synthase, F0 subunit b [TIGR03321] alternate F1F0 ATPase, F0 subunit B |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00340418 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.241509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCG ATTGGTTCAC CGTCATTGCA CAGGTAATCA ACTTCCTTAT CCTGGTGTGG TTGTTGAAAC GTTTTCTTTA CAAACCAATA CTCAACGCAG TCGACGCACG CGAGAAGAGG GTCGCAGATG AACTTAAGAA TGCGGATGAA AAAGAAGCAG AAGCTCAAAA AGAGAAAGAA AAATTCAAGC GCAAGAACGA GGAATTCGAC CAGCAGCGTA ATGACTTCTT GAACAAAGCA AAGGAAGAAG TACAGGCCGA ACGTCAGCGG CTTTTCGAAG ATGTGAGGGA GGAAGCCTCC TATTTGAGAG CAAAACAACA GGAGGCATTA AGGAACGAAG GACAGAATTT AAGTCAGGAA ATAGGCCGCC GGACCCAGCA GGAAGTTTTT TTCATAGCTC GAAAAGTACT GACCGATCTG ACTGAAACCA GTCTGGAAGA ACGTGCAGTT GACGTGTTTG TTCAAAGGCT GCGCAATCTG AAAGATAATG AAAAGAAGCA GTTAGCCTCA GCGCTTAGTA CATCACCGGG TCAGGTGCTC ATTCGTACTG CATTTGATCT TCCACAAGCG CAGCGTGATT CTATTAAAAA GACGATTAAA GAAACTCTTG GTATAGAAAT TCAACCCAGG TTTGAGACTG CACCAGACCT TGTCAGTGGT ATCGAATTAA CCACAGACGG ACAAAAAGTT GCGTGGAGTA TTGCAGATTA TCTTACATCG ATGCAAAAAA GTATCGACGA ATTGCTGAAC GAGCAGCCTG AGAATAAAGC CAAAACCGAA CCTCAAACCA AAAATAACAA AGCTAAAACC GAACCTCAAA CCAAAAATAA CAAAGCTAAA ACCGGACCTC AAACCAAAAA TAACAAGCCC AAATTGGAAA AAGAACCAGA GGCTGAACAG GAGCTTGAAG CTGAGACTAA TAAACCCAGA TCGAAAACTG AGTCAGAAGT TGAAACCAGG CCTGAAACTG ATTATAATAA GCTCAGATCG AAAACTGAGT CAGAGGCTGA ACAAGAGTCT GAGGCTAGAC AAGAGTCTGA GGCTAGACGA GAGCCTGATG CAAAACAAGA GTCAGAGGCT AAACAAGATT CTGATGCAAA ACAAGAGTCT GAAGCTGAAC AAAAAACTGA TGCAAAACAA GGTTCAGAGG CTAAACAAGA GTCAGAATTT AAACATCAAT CTGGAACTAA GTCCGAATCT GTGGTTAAGC AGGAGATTAA TCCCAAACCA GAGCCCACAT AA
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Protein sequence | MLIDWFTVIA QVINFLILVW LLKRFLYKPI LNAVDAREKR VADELKNADE KEAEAQKEKE KFKRKNEEFD QQRNDFLNKA KEEVQAERQR LFEDVREEAS YLRAKQQEAL RNEGQNLSQE IGRRTQQEVF FIARKVLTDL TETSLEERAV DVFVQRLRNL KDNEKKQLAS ALSTSPGQVL IRTAFDLPQA QRDSIKKTIK ETLGIEIQPR FETAPDLVSG IELTTDGQKV AWSIADYLTS MQKSIDELLN EQPENKAKTE PQTKNNKAKT EPQTKNNKAK TGPQTKNNKP KLEKEPEAEQ ELEAETNKPR SKTESEVETR PETDYNKLRS KTESEAEQES EARQESEARR EPDAKQESEA KQDSDAKQES EAEQKTDAKQ GSEAKQESEF KHQSGTKSES VVKQEINPKP EPT
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