Gene Mbar_A3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3100 
Symbol 
ID3625308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3989233 
End bp3990474 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content43% 
IMG OID637701937 
Producthypothetical protein 
Protein accessionYP_306567 
Protein GI73670552 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b
[TIGR03321] alternate F1F0 ATPase, F0 subunit B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00340418 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.241509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ATTGGTTCAC CGTCATTGCA CAGGTAATCA ACTTCCTTAT CCTGGTGTGG 
TTGTTGAAAC GTTTTCTTTA CAAACCAATA CTCAACGCAG TCGACGCACG CGAGAAGAGG
GTCGCAGATG AACTTAAGAA TGCGGATGAA AAAGAAGCAG AAGCTCAAAA AGAGAAAGAA
AAATTCAAGC GCAAGAACGA GGAATTCGAC CAGCAGCGTA ATGACTTCTT GAACAAAGCA
AAGGAAGAAG TACAGGCCGA ACGTCAGCGG CTTTTCGAAG ATGTGAGGGA GGAAGCCTCC
TATTTGAGAG CAAAACAACA GGAGGCATTA AGGAACGAAG GACAGAATTT AAGTCAGGAA
ATAGGCCGCC GGACCCAGCA GGAAGTTTTT TTCATAGCTC GAAAAGTACT GACCGATCTG
ACTGAAACCA GTCTGGAAGA ACGTGCAGTT GACGTGTTTG TTCAAAGGCT GCGCAATCTG
AAAGATAATG AAAAGAAGCA GTTAGCCTCA GCGCTTAGTA CATCACCGGG TCAGGTGCTC
ATTCGTACTG CATTTGATCT TCCACAAGCG CAGCGTGATT CTATTAAAAA GACGATTAAA
GAAACTCTTG GTATAGAAAT TCAACCCAGG TTTGAGACTG CACCAGACCT TGTCAGTGGT
ATCGAATTAA CCACAGACGG ACAAAAAGTT GCGTGGAGTA TTGCAGATTA TCTTACATCG
ATGCAAAAAA GTATCGACGA ATTGCTGAAC GAGCAGCCTG AGAATAAAGC CAAAACCGAA
CCTCAAACCA AAAATAACAA AGCTAAAACC GAACCTCAAA CCAAAAATAA CAAAGCTAAA
ACCGGACCTC AAACCAAAAA TAACAAGCCC AAATTGGAAA AAGAACCAGA GGCTGAACAG
GAGCTTGAAG CTGAGACTAA TAAACCCAGA TCGAAAACTG AGTCAGAAGT TGAAACCAGG
CCTGAAACTG ATTATAATAA GCTCAGATCG AAAACTGAGT CAGAGGCTGA ACAAGAGTCT
GAGGCTAGAC AAGAGTCTGA GGCTAGACGA GAGCCTGATG CAAAACAAGA GTCAGAGGCT
AAACAAGATT CTGATGCAAA ACAAGAGTCT GAAGCTGAAC AAAAAACTGA TGCAAAACAA
GGTTCAGAGG CTAAACAAGA GTCAGAATTT AAACATCAAT CTGGAACTAA GTCCGAATCT
GTGGTTAAGC AGGAGATTAA TCCCAAACCA GAGCCCACAT AA
 
Protein sequence
MLIDWFTVIA QVINFLILVW LLKRFLYKPI LNAVDAREKR VADELKNADE KEAEAQKEKE 
KFKRKNEEFD QQRNDFLNKA KEEVQAERQR LFEDVREEAS YLRAKQQEAL RNEGQNLSQE
IGRRTQQEVF FIARKVLTDL TETSLEERAV DVFVQRLRNL KDNEKKQLAS ALSTSPGQVL
IRTAFDLPQA QRDSIKKTIK ETLGIEIQPR FETAPDLVSG IELTTDGQKV AWSIADYLTS
MQKSIDELLN EQPENKAKTE PQTKNNKAKT EPQTKNNKAK TGPQTKNNKP KLEKEPEAEQ
ELEAETNKPR SKTESEVETR PETDYNKLRS KTESEAEQES EARQESEARR EPDAKQESEA
KQDSDAKQES EAEQKTDAKQ GSEAKQESEF KHQSGTKSES VVKQEINPKP EPT