Gene Mbar_A3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3054 
Symbol 
ID3625065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3933686 
End bp3934210 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID637701895 
Productputative NTPase 
Protein accessionYP_306525 
Protein GI73670510 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1618] Predicted nucleotide kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.507347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.799807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAA TCGCAGTAAC TGGTATTCCG GGTATTGGAA AATCAACAGT TGTGGCAAAA 
GCTGCTGAAA AACTTGCTGA TCAGCCTGGC TTTAAAATAG GCGGCATCCA GACTGCAGAA
ATCCGGAAAG AAGGACAGAG GGAAGGTTTT TCGATCATGG ACCTTGCTAC TGGAAAAACT
GGAGTCCTGG GAAGCATCAG AGAAAGTGGG CCGAGGGTTG GAAAATATCA CGTTAACCTG
GAAGACCTTG AAAAAATCGG GGCAAATGCT CTCAGGAGCG CCATGGACTG TGACCTGATA
GTCATCGATG AGGTCGGGAC CATGGAGCTC AAATCCGAAG CTTTTGTTTC GGCAGTTAAA
GTAGTCCTGG AATCCGATAA ACCTGTTCTT GCAGTGCTGC ATCGGTCAAG CAGTCACCAG
CTGGTTCAGA GGATGAGGAG AGAATTTGAG GTTTTGGTGG TTAATGAGAA AAACCGGGAT
GGTCTGCCTG GAAAAATTGC AAATCGCTTC AGAGAAATGA GGTGA
 
Protein sequence
MLRIAVTGIP GIGKSTVVAK AAEKLADQPG FKIGGIQTAE IRKEGQREGF SIMDLATGKT 
GVLGSIRESG PRVGKYHVNL EDLEKIGANA LRSAMDCDLI VIDEVGTMEL KSEAFVSAVK
VVLESDKPVL AVLHRSSSHQ LVQRMRREFE VLVVNEKNRD GLPGKIANRF REMR