Gene Mbar_A3038 details

Gene Information

• Locus tag: Mbar_A3038
• ID: 3624835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosarcina barkeri str. Fusaro
• Kingdom: Archaea
• Replicon accession: NC_007355
• Strand: +
• Start bp: 3915974
• End bp: 3916417
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637701880
• Product: hypothetical protein
• Protein accession: YP_306510
• Protein GI: 73670495
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0589] Universal stress protein UspA and related nucleotide-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000975242
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.515565
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTAGTT CAAAGTTATT CGAAAAAATA TTGATAGCAA CTGATGGATC TGAAAAAAAT 
AAGTCTGCGG TTGAAGAGGC AGTAAAAATT GCCCGTGCAT GTGGGTCCAC AGTCTATGCA 
GTCTATGTAA TGGACGAGAG CCTGATGAAA TCTGCTATTG AAGTTCCAAT TGCAGAAGAT 
CTTTACAGAA GAATCAGAGA AGAAGGAGAA GAAGCAGTCA ACGGGGTAAA GGAAATTGCG 
CAGGGTGTGA ATCTGGAGAC CTTCATACTA TCTGGCAGGC CAGCTCGTGC AATCACTGAA 
TTTGCAGAAC AAAAAGAAGT TGATCTAATT GTTGTCGGAA CACAGGGGAA AAGTGGCATT 
GAGAGATTTT TATTAGGCAG CGTTGCCGAC GAGGTTATAA GGACCGCTGG TTGCCCGGTG 
TTGACGATAA AAAGTAGAAA ATAA 

 

Protein sequence

MISSKLFEKI LIATDGSEKN KSAVEEAVKI ARACGSTVYA VYVMDESLMK SAIEVPIAED 
LYRRIREEGE EAVNGVKEIA QGVNLETFIL SGRPARAITE FAEQKEVDLI VVGTQGKSGI 
ERFLLGSVAD EVIRTAGCPV LTIKSRK