| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3007 |
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| Symbol | |
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| ID | 3626669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3869109 |
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| End bp | 3871298 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637701851 |
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| Product | two component system histidine kinase |
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| Protein accession | YP_306481 |
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| Protein GI | 73670466 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3322] Predicted periplasmic ligand-binding sensor domain
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0422303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00299589 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTGGAA TCGATATTAG TAAAAAGGTT CTTTTAATAA CTTTCTTAAT TTTTGGTGTT
CTCACAGTTG TATTTACACT CACTCATAAT ATGCAACTTT CCAATTTTTT AGAGCTTGAA
AAAGTGGACA CCGCGGATAA TGTAGAAAGG GTGCAAAATG CCATTTCAAC CGAGCAGGGA
TATCTTAATC GGACAGTACA GGATTGGGCT TGCTGGGATG ATGCTTACCG TTTTGTTGAA
GACAAGAATC AGAATTATAC AGATGTAAAT CTTCAGAATC AAACTCTTAC AGGAATTAAG
GTTAATGTGA TGATTTTTGT AGATAAATCC GAATCTGTTG TCTATGCAAA ATCAGTAGAT
ATTTATACTG GAGAGGAAAA ACCGGTTCCG GAAAAGCTTC TTAGAATGGT CGAAGACGGA
ACTCTTCTTT CAAAATCCGA AAACGACAGG AAAAGCGGTT TCGTTTTGCT TGACGAAAAT
CCTATGTTTA TTGCCTGTCA TCCGATCCTT ACGACAAAAT ATAATGGACC TATGAAGGGC
ACCTTGATTT TTGGGAGATA CTTTGACGAC ATACTTCTTA ACTCTTTCAA AGAATCTACC
CGTTCTTCTC TTTTAATGTA TACAGTCAAT GAAGATTTGC CTCTTGATTT CCAGACCAAG
TTAAAAAGTA TTTCAGAGAA TCCAGACATA ACTATTGTCG AACCCCTTAG CGAAAATACC
GTAGCTGGAT ATTTTGAATT GCTAGACGTA TCAGGCAAGC CCGCTCTTAT TATGAGGGCG
GATTTTCCAA GAGAACTCTA TGAGTACGGC GAAAAAACCC TGGATAATAT GTATTTCTTC
CTTTTGCTAA CTGCTATCAT GACCGGGGTA GGGGTTAAAT TTGTGTTTGA TAGGTTATTT
ATCTCAAGGT TAATCAGAAT TGATAATTTC GTTACCAAAG TCAGGTCGGA AAAGGATCTT
TCCAGAAGAT TGCCTCTTAA AGACGACGAT GAACTTTACC GTCTTTCAAA GGAAATAAAC
GGAATGTTAA ATGAAATTGA TCTTGCACAG CAAGAATTAA AGGCACAGGA AAGAGAAAAG
AAAGTCCTGC TTGATTCTCT GAATGAACTG GTTATTTTCG TAAACCCTCA ACTTTATATT
ATCTGGGCGA ACAAAGCTGC CCTGGAATTT ATGAAGATAG ATCTTCAAAA AGCAGTGGGT
CTACGCCTTA ATGATACCCT TGATATAAGT ATCCCGTTAT CCTATTCCCT GGATCTTGAA
CAGGTTTTTA TGACAGGCAA TAAAAAATCA GGAGAATTTT CTGGGAAAGA TGACAGAGTC
TGGATTGTTC AGGCAATCCC TGTAACTGAA GAGGGTGGAA AGATCATAGG AGTCCTCGAA
ATGTGTAGGG ACATTACGGA AAGTAAAGCC GCAGAAACCC TTCTTCAGGA AAAACAAATC
GCAGAAGCCG CAAACCGTAC CAAGAGCGAA TTTTTGGCAA ATATGAGCCA CGAGCTGAGA
ACCCCACTTA ACTCTATTAT AGGGTTTGCT GACCTTCTTT ATGAACAGGT GTACGGCGAA
TTGAATGAAA GACAGCTAAA ATCCGTAGGG AACATCTCGA AAAGTGGAAA ACACCTTCTG
AATCTGATAA ATGGCATCCT GGATCTCTCT AAAATAGAAG CTGGAAAAAT GGAGCTCAGT
TATAAACAGT TTGAGCTTGC CAGTAAACTT AACATAATAA AAAATCTTCT GTCTCCTATA
GCCGATCGAA AAAATGTTCA AATTGAAATC AGCATAGATA GCAGCCTTTC CAGTATATAT
GCTGATGAAG CCCGCTTCGT TCAGATTATG TACAACCTTG TAGACAACGC TATAAAATTC
TCCTATGAAA ACGGGCTTGT AAAAATAGAG GCAAGAAAAA AGGGAGATTT GGTAGAAATA
ACCGTCACGG ATACAGGAAT TGGAATTAAA CCCGAGGACC AGAGTAAACT TTTCAAGCCT
TTCAGCCAGG TTGATTCCTT TTTGTCCAAA CAATTCCAGG GAACCGGACT GGGGCTTTCG
CTGGTTAAGC AGATTGTACA GTTACATGGC GGAGATATCT GGTTCAGGAG TAAGCCTGGA
GAAGGAAGCA CCTTTGCTTT CGTGATTCCG ATAGAATGTA TTAAAGTCGA AAATGGAACT
ACCAGATCAG ATAGTAAAGT ACAGGGGTGA
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| Protein sequence | MSGIDISKKV LLITFLIFGV LTVVFTLTHN MQLSNFLELE KVDTADNVER VQNAISTEQG
YLNRTVQDWA CWDDAYRFVE DKNQNYTDVN LQNQTLTGIK VNVMIFVDKS ESVVYAKSVD
IYTGEEKPVP EKLLRMVEDG TLLSKSENDR KSGFVLLDEN PMFIACHPIL TTKYNGPMKG
TLIFGRYFDD ILLNSFKEST RSSLLMYTVN EDLPLDFQTK LKSISENPDI TIVEPLSENT
VAGYFELLDV SGKPALIMRA DFPRELYEYG EKTLDNMYFF LLLTAIMTGV GVKFVFDRLF
ISRLIRIDNF VTKVRSEKDL SRRLPLKDDD ELYRLSKEIN GMLNEIDLAQ QELKAQEREK
KVLLDSLNEL VIFVNPQLYI IWANKAALEF MKIDLQKAVG LRLNDTLDIS IPLSYSLDLE
QVFMTGNKKS GEFSGKDDRV WIVQAIPVTE EGGKIIGVLE MCRDITESKA AETLLQEKQI
AEAANRTKSE FLANMSHELR TPLNSIIGFA DLLYEQVYGE LNERQLKSVG NISKSGKHLL
NLINGILDLS KIEAGKMELS YKQFELASKL NIIKNLLSPI ADRKNVQIEI SIDSSLSSIY
ADEARFVQIM YNLVDNAIKF SYENGLVKIE ARKKGDLVEI TVTDTGIGIK PEDQSKLFKP
FSQVDSFLSK QFQGTGLGLS LVKQIVQLHG GDIWFRSKPG EGSTFAFVIP IECIKVENGT
TRSDSKVQG
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