Gene Mbar_A2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2947 
Symbol 
ID3626146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3787352 
End bp3787909 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content37% 
IMG OID637701792 
Producthypothetical protein 
Protein accessionYP_306422 
Protein GI73670407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.308444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0047844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGAC TGCAAGTAGA TGCTGTTTTA TTGTCATTAA TAGAACATAT GGAAAGCAAG 
GGTAGCTGGT GTGGGGAAGT TCATATTCAG AAAGCATGTT ATCTACTGGA AGAACTCTTT
GGAGACCCGT TGGGACTTGA GTTTATTCTT TACAAACATG GCCCTTACTC TTTTGATCTT
AATGATGAGT TAACAGCTAT GAGAGCGGAT AATATTATTG AATTACGAAC AAAATTTCAG
TTTTATGCGC CGAGTCTTTT ACCTGCCGAG AACAGCCAGC TTATAAAAAA TATGTACCCA
AAAACAATAA AAAAATTCGA ACCCTTAGTA AAATTTATCT CTGAAAATTT TGCATCTTAT
GGAGTTCCCA CACTTGAAAA GACATCAACA GCCCTTTATG TAACTAGGAA GGAGTATACT
GATGGAAGCG TTGAGGATCG TTCTAGGAGA ATTCACAAAC TTGAACCTCA TGTAACGGTA
GAAGAAGCCT GTGAAGCCAT AAAAAACATC GATCTGATTA TAGAGGAAGC TAAGGGGATT
TCATTTTCGA CTACATAA
 
Protein sequence
MKRLQVDAVL LSLIEHMESK GSWCGEVHIQ KACYLLEELF GDPLGLEFIL YKHGPYSFDL 
NDELTAMRAD NIIELRTKFQ FYAPSLLPAE NSQLIKNMYP KTIKKFEPLV KFISENFASY
GVPTLEKTST ALYVTRKEYT DGSVEDRSRR IHKLEPHVTV EEACEAIKNI DLIIEEAKGI
SFSTT